KEGG   Shewanella psychromarinicola: EGC80_10330
Entry
EGC80_10330       CDS       T09848                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
spsr  Shewanella psychromarinicola
Pathway
spsr02024  Quorum sensing
spsr03060  Protein export
spsr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EGC80_10330
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EGC80_10330
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EGC80_10330
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsr02044]
    EGC80_10330
Enzymes [BR:spsr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EGC80_10330
Secretion system [BR:spsr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EGC80_10330
  Eukaryotic Sec-SRP protein
   EGC80_10330
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_24 AAA_33 DnaB_C AAA_30 YqeC AAA_26 AAA_14 AAA_31 APS_kinase Helicase_RecD DUF5700
Other DBs
NCBI-ProteinID: AZG35276
LinkDB
Position
2361700..2363073
AA seq 457 aa
MFENLSDRLSSTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFVNSVKERAV
GQEVSKSLSPGQAFIKIVQNELEKAMGESNEALDLAAIPPAVIMMAGLQGAGKTTSVAKL
GKFLRTRHKKSVLVVSADVYRPAAIKQLETLAAEVEVEFFPSDVSQKPVDIAKAAISYAK
LKFIDVVIVDTAGRLHVDEAMMDEIKQLHATVNPVETLFVVDAMTGQDAANTAKVFNETL
PLTGVILTKVDGDARGGAALSIRSITGKPIKFLGVGEKTDELEPFHPDRIASRILGMGDV
LSLIEEVERGVDKDKAMKLASKVKSGGSFDLEDFREQLQQMKNMGGMMNMIEKFPGVGQL
PPEALAQVQDGKMTGQMEAIINSMTFKERKNPDLIKGSRKRRIALGSGTQIQDVNRLLKQ
FTQMQKMMKKMSAKGGMKKMMRGMSGMLPPGMKLPGR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttatctgacagactgtcaagcacactaaaaaacattagtggccgtggt
cgcttaacagaagacaacattaaagaaaccctgcgtgaagtgcgtatggcgctacttgag
gcggatgtcgctttgcctgttgttagggattttgttaacagcgtaaaagaacgcgctgta
ggacaagaggtgtcaaaaagcttaagcccagggcaagcttttataaaaattgttcaaaac
gaacttgaaaaagccatgggtgagtcgaatgaagccctcgacttagcggcaataccaccg
gctgtgatcatgatggcgggtcttcaaggcgcgggtaaaacaacgtcggttgccaaatta
ggtaagtttttacgcacacgtcataagaaatctgtacttgtggtgagtgctgacgtttat
cgtccagcggcgattaaacagcttgaaacattagccgcagaggttgaagttgagttcttt
ccgtctgatgttagccaaaaacccgttgatattgctaaagcagcaataagctatgcaaaa
ttaaaattcattgatgtggtgattgtcgatacagcgggtcgtctgcatgttgatgaagcc
atgatggatgagatcaaacagctgcatgccactgtcaatcctgttgagacgttattcgta
gttgatgcgatgacggggcaagacgcggctaatacggctaaagtattcaatgaaacgttg
cctttaacgggtgtcatcttgaccaaagttgatggcgacgctcgtggtggtgctgcatta
tctattcgcagtatcacgggtaagccgattaaatttctaggtgtcggtgaaaaaaccgat
gaattagaacctttccatcctgaccgaattgcttcacgcattttaggtatgggtgatgta
ctgtctttaattgaagaagttgaacgtggcgtcgataaagacaaagcgatgaaattggct
tcaaaagtgaaatcaggtggcagtttcgacttagaagattttcgtgagcaattacagcaa
atgaaaaacatgggcggaatgatgaacatgattgagaagtttcctggtgtggggcaatta
ccaccagaggcattggctcaagttcaagacggtaagatgactggacaaatggaagccatc
attaattcgatgacatttaaagaacgtaaaaatccagatttgattaaaggatctcgtaaa
cgtagaatcgccttaggttctgggactcaaattcaagatgtaaaccgcttgttgaagcaa
tttacccaaatgcagaaaatgatgaaaaaaatgtctgcaaaaggtggaatgaagaagatg
atgcgcggaatgagcggaatgttacctccaggaatgaagttacctggtcgataa

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