KEGG   Shewanella psychromarinicola: EGC80_10830
Entry
EGC80_10830       CDS       T09848                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
spsr  Shewanella psychromarinicola
Pathway
spsr00521  Streptomycin biosynthesis
spsr00523  Polyketide sugar unit biosynthesis
spsr00525  Acarbose and validamycin biosynthesis
spsr00541  Biosynthesis of various nucleotide sugars
spsr01100  Metabolic pathways
spsr01110  Biosynthesis of secondary metabolites
spsr01250  Biosynthesis of nucleotide sugars
Module
spsr_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:spsr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    EGC80_10830 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    EGC80_10830 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    EGC80_10830 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    EGC80_10830 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    EGC80_10830 (rfbB)
Enzymes [BR:spsr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     EGC80_10830 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short KR Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: AZG35368
UniProt: A0A3N4E7C9
LinkDB
Position
2471522..2472601
AA seq 359 aa
MKILVTGGAGFIGSAVVRHIINSTQDNVINADKLTYAGNLESLASIASSDRYVFEQVDIC
DRAELDRVFKQHQPNAVMHLAAESHVDRSITGSSDFIQTNIVGTYMLLEATREYWNTLSS
DAKQAFRFHHISTDEVFGDLPHPDELQGHSPNEALALFTENTAYAPSSPYSASKASSDHL
VRAWLRTYGLPTVVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE
DHARALYKVVTSGKVGETYNIGGHNEKQNLEVVQTICTILDALVPKDTPYAEQITYVTDR
PGHDRRYAVDASKISNELNWQPQETFETGLRKTIEWYLTNQDWCQHVQDGTYKGEPLGI
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgaaaattctagtcacaggtggcgctggttttatcggctctgcagtagtgcgccatatc
atcaatagcactcaagataacgtcattaatgctgataaactgacctatgcaggtaatctt
gaatcgttagcgagtatagcgtcaagtgatcgatatgttttcgagcaagtcgatatttgc
gatcgtgcggaattagaccgagtgtttaaacagcatcagccaaatgccgtaatgcacctc
gcagcagaatctcatgttgatcgctccatcactggttcatcagactttatccaaaccaat
atcgttggcacttatatgctgcttgaggcgacgagagagtattggaataccttgtcatct
gacgctaagcaagcatttcgctttcatcatatatctaccgatgaagtgttcggtgatttg
cctcacccagatgagttgcaaggccatagtccaaatgaagcgttagcattatttactgaa
aacactgcttatgcgccaagtagcccttattctgcatcaaaagcatcaagtgaccaccta
gtgagagcatggttacgcacctacggcttacctactgtggtgactaattgctctaacaac
tacggcccttatcactttcctgaaaaattgatcccattggtgatccttaatgcgctagaa
ggcaagccgcttcctatctacggtaaaggtgatcaaattcgtgattggctttacgttgag
gatcatgcccgcgcactttataaagtggtcaccagtggcaaagtcggtgagacctataat
attggtgggcataacgaaaagcagaatttagaagtggtacagactatttgcaccatctta
gatgctctagtgcctaaagacacgccttacgctgagcaaatcacttatgtgacagaccgc
cccggccatgatcgacgatatgccgttgatgcgagtaaaatcagtaatgaattgaactgg
caaccacaagaaacttttgaaacgggtttacgtaaaaccatcgagtggtatttaacgaat
caagattggtgtcaacatgtccaagatggaacttacaaaggcgagccgttaggcatttaa

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