Shewanella psychromarinicola: EGC80_10845
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Entry
EGC80_10845 CDS
T09848
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00521
Streptomycin biosynthesis
spsr00523
Polyketide sugar unit biosynthesis
spsr00541
Biosynthesis of various nucleotide sugars
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
spsr01250
Biosynthesis of nucleotide sugars
Module
spsr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EGC80_10845 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EGC80_10845 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EGC80_10845 (rfbC)
Enzymes [BR:
spsr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EGC80_10845 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZG35370
UniProt:
A0A3N4E3P5
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All DBs
Position
2474441..2474989
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AA seq
182 aa
AA seq
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MNVITTQIPDVKIIEPTVFGDDRGFFMQTWSQQQFEALVTGKPTIFVQDNHSKSNKGTLR
GLHYQTQHTQGKLVRVVGGEVFDVSVDIRKGSPTFGQWVGVYLSAANKRQLWIPEGFAHG
FYVTSDQAEFIYKCTDYYCPGSEESIAWNDPAIGIQWPLTNPPLLSNRDAHQSVLLKHAQ
CL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatcactacacaaattccagatgtgaagattatagagcccaccgtgtttggc
gatgatcgtggcttttttatgcagacgtggagccagcaacagtttgaagcactcgtgaca
ggcaagcctaccatttttgtacaggataaccattccaagtcgaacaagggaacattacgc
ggtttacattatcaaacacaacacactcaaggaaagctggtacgtgtcgtgggcggtgaa
gtgtttgatgtgagcgtcgatattcgtaaaggctcacctacctttggtcaatgggtcggt
gtttacttatctgccgccaataaacgccagttgtggatccctgaaggctttgcccatggt
ttttatgtaacaagcgatcaggctgagtttatttacaaatgtactgattattattgccct
ggatctgaagagagtattgcctggaatgaccccgctattggcattcaatggccgttaact
aacccacctttattatcaaatagagatgctcaccaaagtgtattgctcaagcacgcacaa
tgtttataa
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