Shewanella psychromarinicola: EGC80_11275
Help
Entry
EGC80_11275 CDS
T09848
Name
(GenBank) type 2 isopentenyl-diphosphate Delta-isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00900
Terpenoid backbone biosynthesis
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
Module
spsr_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
spsr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
EGC80_11275
Enzymes [BR:
spsr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
EGC80_11275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
AZG35435
UniProt:
A0A3N4DZ19
LinkDB
All DBs
Position
complement(2567864..2568886)
Genome browser
AA seq
340 aa
AA seq
DB search
MTDISTRKADHIALALQSSHQASQGAGFDRIRFEPNPLPQISLQDVEFNSDFLDRRVAAP
FMIGAMTGGCDNGEMINQHLAEAAQTCNIPMSLGSQRAALERGLPQNVRRWAPSAIVLGN
VGATQLQQHGLDLAKRAVDSVEANALVIHLNPLQELIQPDGDRDWNKVLEAIQHCADKLN
VPVIVKEVGAGMGPNSVKKLMDAGIKWIEIAGRGGTNWASIELSRNGSEREREIASAFLE
WGMDTVEILPAVHAACPSLNFIGSGGVRNGLHIAICIRLGAKMTALAQPFLAPALISTEA
VIEKISIVEEQLRWAMFLTGSQKLSDLRKATLQKSFNQRI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacggatattagtacccgcaaagcagaccatattgcacttgcattacagtcttcacat
caggctagccaaggtgctgggtttgatcgtatacgatttgagcctaatccactcccccaa
atatctctccaagatgtcgaattcaacagcgattttttagacagacgcgtggcggcgcca
tttatgattggcgccatgacaggtggttgcgataatggtgagatgattaatcaacatctc
gccgaagctgctcagacttgtaacattccaatgtcactcggctctcaacgagcggcactg
gaacgcggtttaccacaaaatgttaggcgatgggctccttcagctattgtgcttggcaac
gtaggtgccactcaattgcagcaacatggcttagacttagcaaaacgtgcggtggactcg
gtcgaagcaaatgcgctagtcatccacctcaaccctcttcaggaactaatacagccagat
ggcgatcgggattggaataaggtattagaagcgattcaacactgtgctgacaaacttaac
gtacctgtcatcgttaaagaagtgggtgcaggtatgggtcctaatagcgttaaaaagtta
atggatgctggtattaaatggattgaaattgctggacgcggcggtactaactgggcaagt
attgaattaagtcgaaacggatctgaacgagaacgagaaatcgcgagtgcctttcttgaa
tggggtatggacacggttgaaatactgcctgcagtgcatgcagcgtgcccaagcttaaat
ttcattggctcaggtggagtgcgtaatggcttgcatatagctatttgtattcgattagga
gcaaagatgacagctttagctcaaccatttctagctccagccttaatatcaacagaagct
gttatcgaaaaaatttcgattgttgaagaacagttacgctgggcaatgtttttaaccggc
agtcaaaaattatcagatttacgtaaggcgactcttcaaaaaagttttaaccaaagaatt
tga
DBGET
integrated database retrieval system
