Shewanella psychromarinicola: EGC80_11945
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Entry
EGC80_11945 CDS
T09848
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_11945
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_11945
Transporters [BR:
spsr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EGC80_11945
Antimicrobial resistance genes [BR:
spsr01504
]
Gene variants
Tetracycline resistance genes
Transporters
EGC80_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
AZG35549
UniProt:
A0A3N4DEI2
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All DBs
Position
2729982..2731547
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AA seq
521 aa
AA seq
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MMTSYADSALSVLPPLVAITLAILTRKVLLSLGLGIIFGALLLTQFSLVGTGEYIVQTAS
QLVWKDGELSSWNVYILGFLIVLGMITALITVSGSARAFADWAKLRIRNKRDAKLMTIFL
GCVVFIDDYFNSLVVGSISRPITDRYHISRAKLAYILDSTAAPICVISPVSSWGAYIIAL
IGGILTAHGFADSGHLSVFIQMIPMNFYALFSLLLLVCVAIFGLDVGPMRQHELNALRGN
LFDESKGKPPGAVTDLPEADTGKVIGLFLPIAILVFATVYFMVSSGAEALVAKDQVFSML
GAFENTDVSFSLFFGSLVGLIVTVLLAFQQKVELSMLFKGMSVGARSMLPAIYILLFAWT
ISSVIGQLETGKYMASLATDNIPFALLPAMLFLLAGITAFSTGTSWGTFGIMLPIAADMA
MGSDSTMMLPMLAAVLSGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYALIAALV
SLVGYIVLGFTGSLMAGLVCCSILFVISIVILRFWARKCAI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaagttatgccgattcggctctttctgtattgcctcctcttgtggcaattacg
ttagccattttaacccgtaaagttttattatccttaggtttaggtattatttttggtgcc
ttattactcactcagttttcgctggttggaacgggtgagtatatcgtgcaaaccgctagc
cagcttgtctggaaagacggtgagctgagttcatggaatgtttatattctagggttttta
attgtacttgggatgatcactgcgctgatcaccgtgagtggatcggctcgagcgtttgcc
gattgggccaaactgcgcattcgtaataagcgtgatgcaaagttaatgaccatttttctc
ggttgtgtagtctttattgatgattacttcaacagtttagttgtgggttctatttctcga
cctattacagaccgatatcatatttcacgcgctaaactcgcctatattcttgactctaca
gcagctcctatttgcgttatttctcctgtatcgagctggggtgcatatattattgcgctc
attggcggtattttaacggcacatggttttgctgattctggtcatctaagtgtgttcatt
caaatgatcccaatgaacttttatgcgttgttctcgttactgttattagtgtgtgtggcg
atttttggcttagatgtgggtccaatgcgccagcatgaattgaatgcacttcgaggtaac
ttatttgatgaatcaaaaggcaagccacctggcgccgtgaccgatttaccggaagctgac
accggtaaagtgattgggttgtttttacctatcgccatattagtgtttgcgaccgtttac
tttatggtttccagtggcgctgaggcattagtagccaaagaccaagtgtttagtatgtta
ggcgcattcgaaaatacagacgtcagtttttctctattttttggatctttagtgggattg
attgtcaccgtattgttagcgttccagcagaaagttgagctgtctatgctgttcaaagga
atgtctgttggtgcacgttcaatgctacctgcaatttacattttattatttgcttggact
atttccagcgtaattggtcagcttgaaaccggtaagtacatggccagtttggctactgac
aacattccatttgctttgttaccagcaatgttatttttattagctggtattaccgcattt
tcaaccggaacgagttggggcacctttggcattatgctaccgatagcggccgatatggcg
atgggcagtgatagcactatgatgttacctatgctggcagcggtgctttctggtgctgta
tttggtgatcattgttcgcctatttcagacaccacgattttgtcatcaaccggagccagt
tgccatcatattgaccatgttgtgactcagttgccttatgcacttattgcggccttggtt
agtttagtgggttatatcgtacttggttttaccggttcattaatggccgggcttgtttgt
tgctcaatattatttgtgatcagtattgtgatcctgcgcttttgggctagaaaatgcgcg
atatga
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