Shewanella psychromarinicola: EGC80_12025
Help
Entry
EGC80_12025 CDS
T09848
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00280
Valine, leucine and isoleucine degradation
spsr00650
Butanoate metabolism
spsr00907
Pinene, camphor and geraniol degradation
spsr01100
Metabolic pathways
spsr01120
Microbial metabolism in diverse environments
spsr04146
Peroxisome
Module
spsr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
EGC80_12025
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EGC80_12025
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EGC80_12025
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EGC80_12025
Enzymes [BR:
spsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
EGC80_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AZG35563
UniProt:
A0A3N4DFH6
LinkDB
All DBs
Position
complement(2746503..2747405)
Genome browser
AA seq
300 aa
AA seq
DB search
MLPTKVSVFEVGARDGLQNETPVTTADKLTLIEQLADAGIKRIEAGSFVSPKWVPQMADS
DAVFQQLKRQINRRLGVVYSALTPNLKGFELALAAGADEVAIFGAASETFSQKNINCSID
ESIERFIPLIETAKKHNIAVRGYVSCVLGCPYEGHINVSEVARVSEILYKMGCYEISLGD
TIGVGTPNQARKMVEAVANVVPVDKLALHFHDTYGQALANILACLETGVSVFDASVAGLG
GCPYAKGASGNLATEDLVYMLHGMGIETGIDLTKLALAGDTISRALGRTNGSKVANAIRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccactaaagtgagcgtttttgaagtcggcgcccgtgatggtttgcaaaatgaa
acgccggtaacaaccgcagacaagctgacactgattgagcaactagccgatgcgggtatt
aagcgtattgaagctggcagctttgtgtcgcctaagtgggtgccacaaatggccgactcg
gatgcggtatttcagcaacttaaacgtcaaattaatcgccgccttggcgtggtttacagt
gcattaacgcctaacttaaaaggctttgaactggcactcgctgctggcgctgatgaagtg
gccatttttggcgcggcatcagaaacctttagccaaaaaaatattaattgctccattgat
gagtcaatagagcgctttattccgctgattgaaactgccaaaaagcacaatattgccgtg
cgcggttatgtgtcttgtgtactcggttgcccatacgaaggccatattaacgtcagtgaa
gtcgctagagtatctgaaatcctttataagatgggttgctacgaaatatcccttggcgac
accattggcgttggcacaccaaaccaagcccgtaaaatggtcgaagctgttgctaatgtg
gtacccgtggataaattagccctgcattttcatgacacttacggtcaggcacttgccaat
atactcgcctgccttgaaacaggtgtcagcgtgtttgacgcttcggtagccggccttgga
ggctgcccttacgccaaaggtgcatcgggtaatttagccacagaagatcttgtttacatg
ctccatggcatgggcatagaaacgggcatagacttaacaaaacttgcactagctggcgac
actattagtcgcgcattggggcgcactaatgggtccaaagtagcaaatgcaatcagagca
taa
DBGET
integrated database retrieval system