Shewanella psychromarinicola: EGC80_12175
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Entry
EGC80_12175 CDS
T09848
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGC80_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsr03000
]
EGC80_12175
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_12175
Enzymes [BR:
spsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EGC80_12175
Transcription factors [BR:
spsr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EGC80_12175
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EGC80_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AZG35576
UniProt:
A0A3N4EDH5
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All DBs
Position
2768774..2770309
Genome browser
AA seq
511 aa
AA seq
DB search
MVQIHSDCNVAAQICRQARLSRDARFDGQFFTGVLTTGIYCRSICPAPAPYEKNVRYFDS
AVKAANAGLRPCLRCRPDSAPSSFAWLGTQTTLMRAIKLIEQGFLKGDNPGTVVKLAEKL
GISSRYLNKLFSQGLGTSPKRFALYQQLMFAKQLLHQTPLSMTEVAMAAGFNSIRRFNEI
FKQELRLTPSDLRQKSRSSTNVIHPHKDNHVSTYIKPITLALAYRPPLNWAKMLAFYAFR
QVDNMEVIDDISGRYGRTFSFDGVEGFFYISAHKDKPQLDVSIYLVDANDIKFLHNIVLQ
LRRMFDLNADMDIIQQALLPIIELGAKIDSGLRIPAAGSVFEAACRAVLGQQVSVLQATK
LLNLLVEHYGTSLVIDGKTWRLFPTAEAIAKASLDELNMPGARKLALNALGEFVHQHPDS
MPDDWLAVKGIGPWTVAYVNMRGLSDPDVFLSSDLVIKNRLHALHEQLGKAIETPKSYLN
IAAEIAKQASPWGSYLTFQLWDNDPVIAKKG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtacagatccacagcgattgtaatgttgcagcacagatttgccggcaggctagatta
agtcgtgacgctcgctttgatggtcaattttttacaggggtgctaactacaggtatctat
tgtcgatcaatttgtcccgcgcctgcgccttatgagaaaaatgtgcgttactttgattct
gctgtaaaagcagctaatgctggactgaggccttgccttcgatgtcgaccagatagtgca
ccaagctcatttgcgtggttagggactcaaacaacgttaatgcgggcaataaagttgatt
gagcaaggctttttaaaaggcgacaatccaggaactgtggtcaagctggcagagaaacta
ggtattagcagtcggtatttgaataaactctttagccaaggattgggtacatcccctaaa
cgctttgcgttgtaccaacagttgatgtttgccaaacagttattgcaccaaacaccatta
tcgatgactgaagttgccatggctgcgggttttaatagcatcaggcggtttaatgaaata
tttaaacaagaattacgattaaccccaagtgatttacgccagaaaagtcgatcctcaacg
aatgttattcaccctcacaaagataaccacgtgagtacttatattaaaccaataacatta
gcattagcctacagaccacccctcaattgggcgaagatgttggctttttatgcctttcgc
caagtcgacaatatggaagtaattgatgatatttctggccgttatggtcgaacgttttca
tttgatggcgtggagggttttttttacatttcagctcataaagataaaccccaacttgat
gtgagtatttacttagttgatgccaatgatattaagtttttacacaatatagtgttgcaa
cttcgtcgcatgttcgatttaaatgccgacatggatataatccagcaggcattattaccc
atcatcgaattaggagccaaaattgatagtggtttgcgtattcctgccgcgggtagtgtg
tttgaagctgcttgtcgagccgttttagggcaacaagtgagtgtcctgcaagcgactaaa
ttattaaatttgctggtcgagcattatggtacctcactggtaattgatggtaaaacttgg
cgattattcccgacagcagaagcaatcgctaaggcatcattagatgaacttaacatgcct
ggtgcgcgaaaattagccttaaatgccttgggggaatttgtgcatcaacacccagattct
atgcctgatgattggcttgcggtaaaaggtattggcccgtggacagttgcttacgttaac
atgcgaggcttgagcgatcctgatgtttttttgagctctgacttagtcattaaaaatcgc
ctgcatgcgttacatgagcaattgggtaaagccattgaaacacctaaatcatacctaaat
attgccgctgagatcgcaaaacaagcatcaccgtggggcagttacttaacatttcagctt
tgggataacgatcctgttattgcaaaaaaaggataa
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