Shewanella psychromarinicola: EGC80_12330
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Entry
EGC80_12330 CDS
T09848
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_12330
Transporters [BR:
spsr02000
]
Other transporters
Pores ion channels [TC:
1
]
EGC80_12330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_16
TPR_7
TPR_12
ANAPC3
DUF58
TPR_6
TPR_8
TspO_MBR
Ssl1
Motif
Other DBs
NCBI-ProteinID:
AZG35607
UniProt:
A0A3N4DP51
LinkDB
All DBs
Position
complement(2802405..2804459)
Genome browser
AA seq
684 aa
AA seq
DB search
MVHFIRPEWLIGFIPVVILSALFWRKHSQQSAWKQYIAPHLSQLLITQTVDKTHQPKWLL
IACWMITVIALAGPALNKQSLPVFATEQGRVLIMDMSQSMYATDLSPNRLSYAKFRATDL
LNELKEGETGLIAYAGDAYTISPLTRDSGTILNLLPTLSPDIMPTKGSNLAAALSLAEKL
LAQGGHVSGDIIVMTDGISAQQYNQAKNALNGRYRLSIMAFGSKQGAPIRLADGQLLRDN
SNEVVVTKTDYVLLQQLVQQHQGILVPAQTDGSDVTTLTHWLTSEGDATETELVGETWQD
LGPYLAMLLIIPMLMSFRQGLLTLILNPLLLLGTLMSLSAVNSQPAQASIWQDLWKTQDQ
QAQSAFEQGEFTQAAETFENPQWQASAQYKAGNYQQALAGFEQDNSANGLYNQGNALMQL
NNYQEAINRYQQALEVRSPFAEAQQNLELAKKRREQQKQSDQSNQDPSGDGQQSDDSNSD
KSKQNSNSSSSEQSQSNQQNDEQNNQQSDEQKQNPSQNETGSDQAEPSQGKSEESTDQPS
DPQQQQSDKQENSDNSQAAGEQANSEPSQSNSQSQQSDKKPSDDKSLSNEASMQAESGQA
QNQPTEKQPLSASSTEESTTDKPASDSAEVVSASQMNQDDLPADMQRALRAINEDPQVLI
RNKMQLEYQKRRQNSQPTKDNEQW
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggttcattttattcgcccagagtggctaatcgggtttatcccggtggtgatattaagt
gcattattttggcgtaaacatagccagcaatctgcatggaagcagtatattgctccgcat
ttaagtcagttgctgatcacccaaacagtcgataaaactcatcaacctaaatggttatta
attgcctgttggatgattacagtgatcgcgcttgcaggaccggcattgaataaacaaagc
ctgccagtatttgctaccgagcaaggacgagtgctcattatggatatgtcccagtccatg
tatgccactgacttaagcccgaaccgcttgtcctatgctaaatttagagcgaccgattta
ctcaacgaattaaaagaaggcgaaaccgggctgattgcctatgcaggtgatgcttacact
attagtccattaacccgcgacagtggcaccattttaaatttactgcctacattatcaccc
gatattatgccgaccaaaggctctaacttagcggcagcattatcactagcagaaaaactg
ctggctcaagggggccatgtcagtggtgatattattgttatgaccgatggcatttctgca
caacaatataatcaagccaaaaatgcactcaacggccgttatcgcttatcaatcatggct
tttggcagtaagcaaggcgcacccattcgtttagctgacggccaattactgcgtgataat
agtaacgaagtggtagtgactaaaaccgattatgttttgttgcaacaacttgtgcaacaa
catcaagggatccttgtgccagcccaaaccgatggcagcgatgtcacaacgttaacccac
tggctaacgtcagaaggcgatgcaaccgaaactgaacttgttggtgaaacctggcaagat
ctggggccatatcttgccatgttattaattattccgatgttaatgagttttagacaagga
ttgctcactctaatattgaatccattactattacttggcaccttaatgagcttaagtgcc
gtcaatagccaacctgcacaagcctcaatctggcaagacttatggaaaacccaagatcaa
caagcacaatcagcgtttgagcaaggtgaatttacccaagccgctgaaacattcgagaac
ccacaatggcaagcctctgcgcaatacaaagccggtaattatcaacaagcactagcagga
tttgagcaagataacagtgcaaacggattgtataatcaaggtaatgcactgatgcagctt
aacaattatcaagaagcgattaaccgttatcagcaagccctagaggtacgttctccattt
gctgaagcacagcaaaaccttgagctggctaaaaaaagacgagagcaacaaaaacaatct
gatcagtcaaatcaagacccatcaggcgatggccaacagtcagatgactcaaattcagac
aaatctaagcaaaactctaattcgtcatcctctgaacagtcacaatcaaatcaacaaaac
gatgagcaaaataatcaacaaagcgatgagcagaaacagaacccgtcacaaaacgagact
ggaagcgatcaagcagaaccatcgcaaggcaagtcagaggaaagtacagatcaaccgtct
gatcctcagcagcaacaaagtgataaacaagaaaacagcgacaatagccaagcagctggt
gagcaagctaattcagaaccttcacagagtaatagccaatctcagcaaagtgataaaaaa
ccgagcgatgacaaatcactgagtaacgaagccagcatgcaagcagagtcaggccaggca
caaaatcagcctaccgaaaaacaaccattgagtgcatcatctacagaggaaagtacaaca
gataagccagcaagtgattctgctgaagtggtatcggcttcgcaaatgaaccaagatgat
ttacctgctgacatgcagcgtgcattacgtgccattaatgaagacccacaagtgttgatc
cgcaacaaaatgcaacttgaataccaaaaacgtcgtcaaaatagccaacctaccaaggat
aatgaacagtggtaa
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