Shewanella psychromarinicola: EGC80_12735
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Entry
EGC80_12735 CDS
T09848
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsr03000
]
EGC80_12735
Transcription factors [BR:
spsr03000
]
Prokaryotic type
Helix-turn-helix
Other families
EGC80_12735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
AZG35665
UniProt:
A0A3N4E0M7
LinkDB
All DBs
Position
complement(2886270..2887427)
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AA seq
385 aa
AA seq
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MFQIDTQIAAKIVNRTMKIIGHNINVMNAQAVILGSGEVDRIGTVHEGALLAISQNRNVE
ISQTIASNLQGVKPGLNLPLHYQGQVVGVIGITGEPGTLSHYGELLKMTAEMIVEQANLQ
EQLQWQNRQKEEFISQLIHATEQDLPSLKQWALQLGIDLSLPRVAAIIELDSNNPMYQQD
NQALKQVLSLLQHPVRDNLIAMTSLTQLVILKPAFLDGKQFDPELENQRINKLLKRLPAN
MQLSLHISLGHYFNGDLGISYSYRTAKETMDIGKKLHPTKSKYLYQDYSLQVLLSGLRQH
WRGNALAGPYLKLIEVDKNQQLQKTLTAYLEHMGDIQTCANSLFIHRNTLRYRLDKIQTI
TNIDLHSFNGLLSLYLGQLIHQPNT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagattgatacccaaattgcggctaaaattgtcaaccggaccatgaaaattatt
ggccataatatcaatgttatgaatgctcaagccgttatattgggatcgggcgaagtcgat
cgaattggcaccgtacatgagggcgcattattggctatcagccaaaatcgcaacgttgag
atcagtcaaactattgcctcaaatctacaaggggtaaaacctggacttaatttaccattg
cattatcaaggtcaagttgtcggcgttatcggtattacgggcgaaccaggcacattaagt
cattatggcgagctgcttaaaatgaccgctgaaatgattgtcgagcaagctaatttgcaa
gaacaactacaatggcaaaatcgtcaaaaagaagagtttatttcacagcttattcatgcc
accgaacaagacttaccttcattaaagcaatgggcattacaattaggtatcgatttgagc
ttacctcgagtggccgctatcatcgaactcgacagtaataaccccatgtaccaacaagat
aatcaagcgttaaaacaagtactgtctttattacagcatcctgtacgagataatttaatt
gcgatgacttcgttaacccaattagttattttaaaacccgcgtttttagacggtaaacaa
tttgaccctgaacttgaaaatcaacgcatcaacaaattactcaaacgcttgccagcaaac
atgcaattgagcctacatatttcattgggccattatttcaatggtgatttaggcatcagt
tactcttaccgcaccgccaaagaaaccatggatattggcaaaaaattacacccaacaaaa
agtaaatatttataccaggattacagcttacaggtgcttttatcaggcttacgtcaacac
tggcgaggtaatgcgcttgccggaccctacctgaaactcattgaagtggacaagaatcaa
caattacaaaaaacactcaccgcttatcttgaacatatgggtgacatacaaacctgtgct
aacagtttgtttatacatcgaaatacattacgttatcgattagataaaattcaaaccatc
accaatatcgatttacacagttttaatggattactgagtctctatttaggtcagctcatc
catcagcccaacacttaa
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