Shewanella psychromarinicola: EGC80_12865
Help
Entry
EGC80_12865 CDS
T09848
Symbol
glnS
Name
(GenBank) glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00970
Aminoacyl-tRNA biosynthesis
spsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGC80_12865 (glnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsr01007
]
EGC80_12865 (glnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_12865 (glnS)
Enzymes [BR:
spsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
EGC80_12865 (glnS)
Amino acid related enzymes [BR:
spsr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
EGC80_12865 (glnS)
Transfer RNA biogenesis [BR:
spsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EGC80_12865 (glnS)
Prokaryotic type
Other AARSs
EGC80_12865 (glnS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
AZG35688
UniProt:
A0A3N4DWQ2
LinkDB
All DBs
Position
2920235..2921905
Genome browser
AA seq
556 aa
AA seq
DB search
MSHVDTEVRPSNFIRNIIDEDLKSGKHSQVHTRFPPEPNGYLHIGHAKSICLNFGIAKDY
QGQCNLRFDDTNPEKEDINYVNSIQEDVRWLGFEWSGDIRYSSNYFEQLHQYAVELITKG
LAYVCFLNGEQTREYRGSLKEPGKNSPYRDTSIEENLTLFEKMRKGEFKEGECALRAKID
MASPFMCMRDPIIYRIRFAHHHQTGDKWCIYPMYDFTHCVSDAIENITHSICTLEFQDNR
RLYDWVLDHLDDFKIPDRTRQYEFSRLNLEYTLMSKRKLNDLVVRKLVTGWDDPRMPTIA
GLRRRGYTAASIREFCSRIGVTKQDNLVEVGMLDACIREELNEHAPRAMAVLRPIKVVIE
NYSNTETETIIAAAHPNNETMGTRELTFGRELFIDVADFKEEANKHFKRLVLGKEVRLRN
AYIIKADRCDKDADGNITTVYCTYDADTLGKNPADGRKVKGVIHWVEASTAKPAEFRLYE
RLFTNVNPAAFETVDEVLNPNSLTVVKGLVEPSLGNASAEKTYQFEREGYFCADSKDSSA
EHLVFNLTVPLRDTFA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggacaccgaagtacgtccaagtaacttcattcgtaatatcatagacgaa
gacctaaaaagcggtaagcatagccaagtacatactcgtttcccaccagagcctaacggg
tatttacatattggccatgctaaatctatttgcttaaattttggtattgccaaagattat
caaggtcagtgtaacttacgttttgatgatacaaatcctgaaaaagaagacatcaattat
gttaattctattcaggaagacgtgcgctggttgggctttgaatggtctggcgatatccgt
tattcatcgaattattttgagcagttacaccagtatgctgttgagttaattactaaaggg
cttgcttacgtttgttttttaaatggtgagcaaacaagagaataccggggttcattaaaa
gaaccgggtaaaaacagtccttatcgtgataccagtattgaagaaaacctcacgctgttt
gaaaaaatgcgtaaaggtgaattcaaagaaggcgaatgtgcactgcgcgccaaaatcgat
atggcatcgccttttatgtgtatgcgtgatcctattatttaccgtatacgttttgcccat
catcatcaaacgggggataaatggtgcatttatcctatgtacgattttacccattgtgtt
tcagatgcgattgaaaatattactcattcaatttgtacgttagagtttcaagataatcgt
cgtttatacgattgggtattggatcatttagacgattttaaaatcccggatcgtacgcgt
cagtatgagttttcgcgtttgaatcttgaatatactctgatgtctaagcgtaagttgaat
gatctagtcgtacgtaaactcgtcaccggttgggatgacccaagaatgccaacgattgcg
ggcttgcgtcgtcgtggttatacggctgcatctattcgtgagttttgctcacgtattggc
gtcaccaagcaagataatttggttgaagtaggcatgttagatgcttgtatccgtgaagag
cttaatgagcatgctcctcgagcaatggcagtgttaagaccgataaaagtcgtcattgaa
aactattcgaatactgaaaccgaaaccattattgctgctgctcatccaaacaatgaaacc
atgggaactcgtgagctgacatttgggcgtgagctatttattgacgtcgcagattttaaa
gaagaggcaaataagcattttaaacgactggttttaggtaaagaagtccgtttacgtaat
gcttatattatcaaagcagatcggtgtgataaagacgctgatggtaatatcacaacggtt
tattgtacctatgatgcagatactttaggcaaaaatcctgctgacggtcgtaaagtaaaa
ggggttattcattgggttgaggcatcaacagcgaaacctgctgagtttcgtttgtatgaa
cgtctatttaccaatgtaaatcctgcggcttttgaaacggtcgatgaagtccttaacccc
aattcacttactgtggtcaagggactggttgaacctagtttgggcaatgcttcggctgaa
aaaacctaccagtttgagcgtgaaggttatttctgtgctgacagtaaagattctagcgct
gaacatttagtgtttaacttaaccgtaccgttacgagatactttcgcgtaa
DBGET
integrated database retrieval system
