Shewanella psychromarinicola: EGC80_13130
Help
Entry
EGC80_13130 CDS
T09848
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsr03009
]
EGC80_13130
Enzymes [BR:
spsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EGC80_13130
Ribosome biogenesis [BR:
spsr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EGC80_13130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AZG35735
UniProt:
A0A3N4E8P8
LinkDB
All DBs
Position
2981886..2982578
Genome browser
AA seq
230 aa
AA seq
DB search
MRLDRFICKSTELLRYDAIQLIHSGEVLVNGVVVRNEAVQVHENNEVSLNGQKLAARAFR
YMLINKPANTLCSNVDGVYPSLFSLIDVERPSELHIAGRLDADTTGLVLITDDGRWTFAI
TSPSGQCHKVYRVKLAKPIAADACESFLQGIALQGEQELTLPAHLLIITPQEVLLTLTEG
KFHQVKRMFAAIGNKVLSLHRESIGAVSADVAAGEWRYLTDVEIRSFGDK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgatcgatttatttgtaaaagtactgagctattaaggtatgacgcgatccaa
ctaattcatagtggtgaggtgttggttaatggtgtggttgttaggaatgaagctgttcag
gttcatgaaaataatgaagttagcttaaacggtcaaaagcttgcagctcgagcttttcgc
tatatgttaatcaataaaccagccaatactctttgttcgaatgtcgatggtgtctatccg
tcgttattttcgttaattgacgtcgaacgcccatctgagttgcacattgccggacgatta
gatgccgacacaaccggattagtgcttattaccgatgatggtcgttggacatttgctatc
acatctccgtctggacaatgccataaagtttaccgggttaaattagctaagccgatagcc
gcagatgcttgtgagtcttttttacaaggcattgctttgcaaggggaacaagagctgaca
ttaccggcgcatttgctcattatcacacctcaagaagtattgctgactttaacggaaggc
aagtttcatcaagtaaagcgtatgtttgctgctattggtaataaagtgttgtctcttcat
cgtgaaagtattggtgctgtgagtgccgatgtagcagcaggggagtggcgttatttaacc
gatgtggaaattcgctcatttggtgataaatga
DBGET
integrated database retrieval system
