Shewanella psychromarinicola: EGC80_13265
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Entry
EGC80_13265 CDS
T09848
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGC80_13265 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_13265 (recC)
Enzymes [BR:
spsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EGC80_13265 (recC)
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGC80_13265 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TM231
Motif
Other DBs
NCBI-ProteinID:
AZG35754
UniProt:
A0A3N4DAC3
LinkDB
All DBs
Position
complement(3015263..3019018)
Genome browser
AA seq
1251 aa
AA seq
DB search
MLTLIQSNQMEVLSEQLAKLLAIPLDNVSLLASEHVLVQSPGMSTWLRLEIAKHNGIAAA
LSFPLPSSFTWQLCHDLLPNVPKDNAFTKAAMTWKLMDLLPSLLDNPDFSPLKQYLSPQV
DTTIDASTDVADTDVGVDANTDTDVHTANTHALLQLNQSHDAIKLFQLCGRIADIFDQYL
VYRPEWILAWEQNQPLSSLDNRLTLDENQQWQPILWRALIDYNQHHLHASHYHRANLHAD
LIATLANPDTDLSMLPARLYVFGISSMPPQTLDVLYHLASRIDVIMLSLSPCQHYWGDII
EPKTRARMALQYANKKQLDQDWEDKLEVGNPILANNGQMGRELLDLMLGLPPEHTDFGYD
CYVEPEPNNLLHGVQYDILQMETLGQPLGPNADLYQDIHARRELLPSDDSITLRSCHSAL
REVETLHDHLLALLSNNSELTPKDIVIMMPDVAAYAPYIDAVFGTANSQYFADKNPQKGD
YYIPYAIADRGAAQESPLINSFLSLLNINQSRFGLTDIIGILEVPAILRRFQLDDDELSL
IRRWLDDANVRWGRSEQTRSQLGVQPFTQNSWAFGIKRLILGYAFNDEADIYRDTLMVQG
IEGQSSQALGKLLNFLETIDRYFTLFASDFSTTERLEQLQQLLADCYDTDDDEREQIQAI
RDALVTLDTELDSAGHQGQVNIEVLKQWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPF
KVVCLLGMNDGVYPRVQHPVGFDLMAHFGPKKGDRSRRLDDRYLFLEALLSAREQLYISY
IGHSERDNAERIASMLVSELVEYCQLSYLPQKMVQQLEQQADINLDDADKAVLTQLIQAQ
PLQPFDAKLFRDTQQAVDSLSKLQHSFNAQWCPPPANATINNHFFQQALPLSVEQADEVF
AHTQINSEGIKVVELELSSLIRFYRNPAQFFFNRSLKVDLSLNIQADDNDEPFSLNALER
YLLQSRMLDNAIEHQLDSPDNELLSKLKTSGELPMAPFDDLLISQYLRDISPLINRVQFL
QDQQAMHTLHVDVNFDLLVQDLPAQEHAPKVRVNLVGRIDDILPKGLVNYRPGTAHGRDF
IRVYLRHLCINAMANSSTSGLGKNQFSYLLDIGHFHAFAPITAEQAKAQLMRFITGFIQG
QAQPLCFMPKTAFTYVETEGDHDEKLLKAQQKWDDGQNKFGEGHDPHNQRLFHFPDDFGE
ATFGALANQLLQPMLSQYHKDKLAELEPFVSGTAVDIQAQFISSAAQQGAQ
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgcttactttaattcaatctaatcagatggaagtgttatctgaacaactggccaaacta
ttggccattcccttagataacgtcagtttattagccagtgagcatgtgttagtacaaagc
ccgggaatgtcgacttggctacgcttagagattgctaaacacaatggtatcgctgccgca
ttatcgttccctttgccatcaagttttacctggcagttgtgccatgacttgctgcctaat
gtgccaaaagataacgcctttaccaaagccgccatgacgtggaaattgatggacttatta
cccagtctgttagataaccctgattttagtccgctaaaacaatacttatcaccgcaagta
gataccacaatagatgcatcaactgatgttgctgatacagatgtaggtgtagacgcgaat
actgataccgatgttcatacagcaaatacccacgccttattgcaactcaatcagtcacat
gacgcgattaagctgtttcaattgtgtggccgtattgccgatatttttgaccaatactta
gtctatcgccccgagtggattttagcgtgggagcaaaaccagccattatcgagcctagac
aatcgccttacattagatgaaaaccaacaatggcaaccgatcctgtggcgggcattaatc
gactataaccaacaccatttacacgccagccattatcatcgcgccaatttgcatgccgac
ttaatcgcaaccttagccaatccagacactgacttatccatgctacccgcacgattatac
gtgtttggtatttcctccatgccgccgcaaacgctggatgtcttgtaccacttggccagt
cgtattgacgttattatgttatcactcagcccttgccagcattattggggcgacattatt
gaacccaaaacccgcgctcgcatggcactgcaatacgccaacaaaaaacaactcgaccaa
gactgggaagacaagctagaagtgggtaacccgatattggccaataatggtcaaatgggc
cgtgaactgctcgatttaatgcttggcctaccgccagaacataccgactttggttacgat
tgttatgtggaacccgagcccaacaacctgctgcacggggtgcaatacgatatcctacaa
atggaaactcttggccagccattagggccaaatgcagatttataccaagatattcatgct
cgccgtgaattattacccagcgatgattcgattacgctgcgcagttgccacagtgccctg
cgagaagtagaaaccttacatgatcaccttttagcgttactgtctaacaacagtgaatta
accccgaaagatatcgtgatcatgatgcccgatgtggccgcttacgcgccttatattgat
gcggtatttggcaccgccaacagtcagtattttgccgataaaaacccgcaaaaaggcgac
tactatattccctatgccattgccgaccgaggcgcggcgcaagagtcaccattaattaat
agctttttaagcctgttaaacatcaatcaaagtcgctttggcctaacggacattatcggt
attttagaagtgccggccattttgcgccgcttccaactcgatgatgacgaattgtcattg
atccgccgctggttagatgatgccaatgtgcgttgggggcgcagtgaacaaacgcgcagc
caattaggcgtgcaaccttttacacaaaactcatgggcatttggcattaagcgtttaatc
ctaggttacgcctttaacgacgaggccgacatttaccgcgacaccttaatggtacaaggc
attgaaggtcagtcatcacaggcattaggtaaactgctcaactttttagaaaccattgac
cgctattttacgttatttgccagcgacttcagtacaactgaacgcctcgagcaattacag
cagttactagccgattgttacgacacagacgatgatgaacgcgagcagattcaagccatt
cgcgacgccttggttaccctcgacaccgaacttgacagtgccggtcatcaaggccaagtg
aatatcgaagtgttgaaacaatggtttaatcaacgcttaacagaatcccgagtcggccaa
cgttatcttgccggcagcgtcaatttttgtactttaatgcccatgcgctctattcccttt
aaggtggtgtgtttgctgggcatgaatgacggcgtctatccacgggtacaacatcctgtc
gggtttgatttaatggcccattttggccctaaaaaaggtgaccgttcgcgccgattagac
gaccgatacctgtttttagaggcgttattgtcagccagagagcaactgtatattagttat
attggccacagtgaacgcgataacgctgagcgtattgcgtcgatgttagtctctgagtta
gtggaatattgccaactaagctacctgccgcaaaaaatggtgcagcagcttgaacagcaa
gctgatatcaaccttgatgacgccgacaaagccgtattaacccagctcattcaagcacaa
ccattacaaccttttgacgctaaactgtttcgcgacacacaacaagctgtcgatagctta
agcaaattacaacacagttttaatgcccaatggtgcccgccaccagccaatgcgaccatc
aataatcactttttccagcaagcattacctttatcggtcgaacaagccgatgaggtattt
gcccacactcaaatcaatagtgaagggattaaagtggtcgagcttgagttatcgtcatta
atccgtttttatcgtaatccggcgcaatttttctttaaccgcagtttaaaagtggatttg
tcgctcaatattcaagccgatgacaacgacgaaccctttagcttaaatgcactcgagcgc
tatttactgcaatcaagaatgctcgacaatgccattgaacaccaactcgacagccctgat
aatgagttgctcagcaagctcaaaaccagtggtgaactgccgatggcgccgtttgacgac
ttgttaatcagccaatatttacgcgatatatcgccattgattaatcgggtacaattttta
caagatcaacaagccatgcacactttacatgtggatgttaactttgatctactggtgcag
gatttaccagcacaagagcatgcaccaaaggtgcgagtgaatcttgtcgggcgtattgac
gatattttgcctaaaggtttagttaattaccgcccaggcaccgcccacggacgggatttt
attcgagtatacttacgccatttgtgcatcaatgctatggccaattcgtcaacgtcgggc
ttaggtaaaaatcaatttagttacctactcgacattggtcattttcatgcctttgcacca
attactgccgagcaagccaaagcgcaattgatgcgctttatcactggttttattcaaggc
caagctcaacccttgtgttttatgcctaaaacagcttttacctatgttgaaaccgaaggc
gatcatgatgaaaagctgctcaaagcccagcaaaaatgggatgatggccaaaataaattt
ggtgaaggtcacgatccacataaccagcggttatttcatttcccagacgactttggtgaa
gcgacatttggcgcgttagccaaccaattactgcagcccatgttaagccaatatcacaaa
gataaactggcggaattagaaccctttgtcagtggcacagcggtagacattcaagcgcaa
ttcatttccagcgcagcccaacaaggagcgcaataa
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