Shewanella psychromarinicola: EGC80_14185
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Entry
EGC80_14185 CDS
T09848
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EGC80_14185 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_14185 (msbA)
Enzymes [BR:
spsr01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EGC80_14185 (msbA)
Transporters [BR:
spsr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EGC80_14185 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
DEAD
nSTAND3
MMR_HSR1
ABC_ATPase
G-alpha
AAA_25
AAA_23
AAA_16
NB-ARC
AAA_15
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
AZG35913
UniProt:
A0A3N4DG47
LinkDB
All DBs
Position
3223896..3225698
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AA seq
600 aa
AA seq
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MSASPKNEIWIVFKRLMAYIVPMKAMFIMAVLGLITYGAVDAAFIAFIKPFIDEGFSQTP
AIAAGVDLPTHGGFNANKDIMLMAPIAVIVMFSIRGVANFVSTYCVSFMSAQLIMDMRQQ
VFEHYLRLPVSYIDRENSGNLISRVTYDTEQIARASGSALISIVRDSMTAIGMLGIMFYY
SWKLSLCILVIGPIMGVVISIVSKRFRKVSKQIQSAMGGVTATTEQMIKGHKNVLVFGGQ
KTEVARFYKVNDQNRYQNMKLAVAQSISQPLIMVIGSFALAFVLYAATWESMRTDLTAGT
FAAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTEPEPDTGEFSIDRVQGKLT
FENVTFTYPGQEKSALNSIDFEVKPGKTIALVGRSGSGKSTIASLITRFYSGLSTGDIRL
DDTSIYDYQLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEVTREQIVHAAELAYAMEF
IDTLPLGLDTQVGENGVLLSGGQRQRLAIARAMLRDAPVLILDEATSALDTESEKAIQKG
LDNLRHNRTSIVIAHRLSTIESADEILVIDQGRVVERGNHSELIAQAGIYANLYQMQFSQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcacctaaaaatgaaatatggatcgttttcaaacgtttgatggcctatata
gtcccaatgaaagccatgtttattatggctgttctaggccttattacctatggcgcagtc
gatgcggcgtttattgcatttattaagccttttattgatgaaggtttcagccaaactcca
gcgatagctgctggtgtcgacttaccgacacatggtgggtttaacgccaataaagacatt
atgttaatggctcctattgcggttattgtcatgttcagcatacgtggcgtggctaacttt
gtgtcgacctattgtgtctcattcatgagtgcacagctcatcatggatatgcgccaacaa
gtttttgaacattatctgcgtttacccgtgagttatatcgaccgcgaaaatagtggtaat
ttgatttcacgtgtcacgtacgatactgaacaaattgctcgtgcatccggtagtgcgttg
atttcaattgtccgtgacagcatgaccgcgatcggtatgttaggcattatgttctactat
tcgtggaaattatcattatgcatattggtgataggcccaattatgggcgttgtgatcagt
attgtcagtaagcgttttcgtaaggtttctaagcaaattcaatctgcaatgggcggcgtt
accgcaaccactgaacagatgattaaaggccataaaaacgtgttggtgtttggtggccaa
aaaacagaggttgctcgtttttataaagttaacgaccaaaaccggtatcaaaatatgaag
ctagcggtggctcaatcaattagccaaccgctcattatggtgattggatcttttgctctg
gcttttgtactgtatgccgccacttgggagagcatgagaacggatttaaccgctggaacg
tttgcggctattttaggtgccatgttagccatgcttcaaccgattaaaaacttaacccgt
gttaatgccgaatttcaacgaggcattgccgcctgcacgacagtgtttgaattattagac
acagaaccagagccagatacgggtgagtttagtattgatcgtgttcaaggtaagctgaca
tttgaaaatgtcacgtttacttatccaggccaagaaaagtccgccttaaacagtattgat
tttgaagttaaaccgggtaaaaccattgcattagtcgggcgttctggctctggtaagtcg
accatcgccagtttgattacccgtttttatagtggcttgtcaaccggtgatatccgcctt
gatgacaccagcatttacgattaccagttaaaatcattacgtaatcaagtggctttagtg
tcacagcaagtgaccttatttaatgacactattgctaataatattgcctatgcttaccca
ggcgaagtgactcgagagcagattgtccatgccgctgaactggcttatgcgatggaattt
attgataccttgccactgggattagacacccaagtgggtgaaaacggggtgttactttca
ggcggtcaacgtcaacgtcttgccattgctcgtgctatgttacgtgatgcgccagtgtta
attttagatgaagccacatcggctttggataccgagtctgaaaaagcgattcaaaaaggc
ctcgataatcttcgacataaccgtacatcgattgtgattgcccatcgtttatccaccata
gaaagcgccgatgaaattttggttattgatcaaggtcgagttgttgaacgtggtaatcac
agtgaattaattgcccaagcaggtatttacgccaacctttaccagatgcagtttagccaa
taa
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