Shewanella psychromarinicola: EGC80_14250
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Entry
EGC80_14250 CDS
T09848
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00020
Citrate cycle (TCA cycle)
spsr00190
Oxidative phosphorylation
spsr00650
Butanoate metabolism
spsr00720
Other carbon fixation pathways
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
spsr01120
Microbial metabolism in diverse environments
spsr01200
Carbon metabolism
Module
spsr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spsr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spsr_M00149
Succinate dehydrogenase, prokaryotes
spsr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EGC80_14250
00650 Butanoate metabolism
EGC80_14250
09102 Energy metabolism
00190 Oxidative phosphorylation
EGC80_14250
00720 Other carbon fixation pathways
EGC80_14250
Enzymes [BR:
spsr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EGC80_14250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AZG35926
UniProt:
A0A3N4E1K1
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All DBs
Position
3242605..3244371
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AA seq
588 aa
AA seq
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MSIPVREFDVIVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQEAIEFMCQTGPEAIIELEQMGLPFSRFEDGTIYQRPFG
GQSRNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTDVYSEWYALDLVKNNDGVVVGC
TAIEIETGNIVYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAARAGVQLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHLLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PTKVSGQVIRQNDDGTEQDVLGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDDTPDPKAATDVEIDASLARLNRWESNKDGEDPAVIRKDLQLCMQLNFSVFRSGEAM
AEGLEQLQAIQKRLENAKLSDNSTEFNTQRIECLELDNLMATALSTAYAANFRTESRGAH
SREDYLDRDDDNWLCHSLYDPMTQAMSKRDVNMTPQLREAFPPVKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagttcgcgaatttgatgtgatcgtaatcggcgccggtggcgcaggtatg
cgagcagcattacagatttctaaagaaggtaagagctgtgcgctgttatctaaagtattc
ccaactcgttcacataccgtttctgctcaaggtggaatcacagtagcattaggtaatgct
catgaggaccattgggaacagcacatgtacgatacggttaagggttctgattttatcggc
gaccaagaagccattgagtttatgtgtcaaacgggtcctgaagcgattatcgaacttgag
caaatgggtttacccttctctcgtttcgaagacggcacaatctatcagcgtccttttggt
ggccaatcaagaaactttggtggcgagcaagccgctcggactgcagcagccgctgaccga
acgggtcatgcactgcttcattgtttataccaacaaaatgttaagcataaaactgacgtt
tattctgagtggtatgccttagatttggttaaaaataatgatggtgttgtggtcggttgt
accgcgattgaaattgaaaccggcaacattgtttatttcaaagctaaagcaacaatttta
gcaaccggtggtgcagggcgtatttatgcctcaaccactaatgctcatattaatactggt
gacggtgtgggtatggctgcgcgtgctggcgttcaattacaagacatggaaatgtggcag
ttccacccaacgggtatcgctggcgcgggtgttttggtgactgaaggttgtcgcggtgaa
ggcggatacttattaaataaagatggcgaacgtttcatggaacgttatgcgccaaacgcg
aaagatttagcctcacgcgacgtggttgcacgttcaatgatgactgaaattcgtgaaggt
cgtggtttagacggtcctttaggcccgcatttgttacttaagcttgatcatttaggcaaa
gaaacccttgaagcgcgtcttcctggagtgtgtgaattatcacgtacctttgctcatatc
gatcctgctgatggtcctattcctgtgttaccaacgtgtcattacatgatgggcggttta
ccgactaaagtgagtggtcaagttattcgtcagaatgacgatggcacagagcaagatgta
ttaggtttatttgccgtaggtgagattgcctgtgtatctgttcacggtgcaaaccgctta
gggggtaactcactgcttgatttagtggtcttcggtcgtgcggcaggacaacatttaggc
aaagcattagacgacactcctgatccaaaagcggcgacagacgtagaaattgatgcatca
cttgctcgtcttaatcgttgggaaagcaacaaagacggtgaagaccctgcggttatacgt
aaagatcttcaattgtgtatgcagttaaatttctctgttttccgcagtggtgaagccatg
gctgaaggtttagaacagctgcaagcaattcaaaagcgtcttgaaaatgccaagttatct
gacaattcaacagaatttaatactcaacgtattgagtgcttagaattagataacttaatg
gcaacagcgctgtcaactgcttatgcggctaacttccgtactgaaagtcgtggtgcgcat
tctcgtgaagattatttagatcgtgatgatgacaactggttatgtcatagcttgtatgac
ccaatgactcaagctatgagtaaacgtgatgtcaacatgacacctcaattacgtgaagcg
tttccaccggtaaaacgtacctattag
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