Shewanella psychromarinicola: EGC80_14275
Help
Entry
EGC80_14275 CDS
T09848
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00020
Citrate cycle (TCA cycle)
spsr00640
Propanoate metabolism
spsr00660
C5-Branched dibasic acid metabolism
spsr00720
Other carbon fixation pathways
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
spsr01120
Microbial metabolism in diverse environments
spsr01200
Carbon metabolism
Module
spsr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spsr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EGC80_14275 (sucD)
00640 Propanoate metabolism
EGC80_14275 (sucD)
00660 C5-Branched dibasic acid metabolism
EGC80_14275 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
EGC80_14275 (sucD)
Enzymes [BR:
spsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EGC80_14275 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AZG35931
UniProt:
A0A3N4DCT5
LinkDB
All DBs
Position
3250583..3251455
Genome browser
AA seq
290 aa
AA seq
DB search
MSVLINKDTKVICQGFTGGQGTFHSEQAIDYGTQMVGGVSPGKGGQTHLGLPVFNTVKDA
VAQTGATATVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMLQVKVKLEETGVRMI
GPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAEYIKAHVTKPVVSYIAGVTAP
EGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALRTKTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttttaattaacaaagataccaaggtgatctgtcaaggtttcactggtggtcag
ggtactttccactctgagcaagcaattgactatggcacacaaatggttggcggtgtttct
cctgggaaaggtggtcaaactcacctaggtcttccagtatttaatactgttaaagatgca
gtcgctcaaacaggtgcaacggcaacggttatctatgtgccggcaccattttgtaaagac
gctatccttgaagccatcgatgctggtattgagctaatcgtttgtatcactgaaggcatc
cctacacttgatatgctgcaagtgaaagtgaagctagaagaaactggcgttcgcatgatc
ggtcctaactgcccaggtgttatcactccgggtgaatgtaagattggtattatgcctggt
cacattcacaagcctggtaaagtcggtattgtttctcgctctggtacattaacgtacgaa
gcggttaagcagacaactgatgaaggtttcggccaatcgacttgtgtcggtattggtggt
gaccctattcctggtactaacttcatcgacgtattggaaatgttccaaaacgatccacag
acagaagcgattgtgatgatcggtgaaatcggtggcacggctgaagaagaagcggctgaa
tacatcaaagcacacgtcactaagcctgttgtgtcttacattgctggtgtcactgcacca
gaaggtaagcgtatgggccatgctggcgcaataatcgctggcggtaaaggtactgctgct
gataagtttgcggctttagaggctgctggtgtaacgactgttcgctctttagctgacatc
ggtaaagcactacgaactaaaacaggctggtaa
DBGET
integrated database retrieval system
