Shewanella psychromarinicola: EGC80_15055
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Entry
EGC80_15055 CDS
T09848
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGC80_15055 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsr01007
]
EGC80_15055 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_15055 (aspS)
03029 Mitochondrial biogenesis [BR:
spsr03029
]
EGC80_15055 (aspS)
Enzymes [BR:
spsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
EGC80_15055 (aspS)
Amino acid related enzymes [BR:
spsr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EGC80_15055 (aspS)
Transfer RNA biogenesis [BR:
spsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EGC80_15055 (aspS)
Prokaryotic type
Other AARSs
EGC80_15055 (aspS)
Mitochondrial biogenesis [BR:
spsr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EGC80_15055 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AZG36064
UniProt:
A0A3N4E111
LinkDB
All DBs
Position
3428805..3430580
Genome browser
AA seq
591 aa
AA seq
DB search
MRSHYCGDVNKSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFDIA
STLRSEFCVQVKGVVSARPESQVNSNMKTGEIEILGKQLTIINASAPLPLSMDNYQNNSE
EQRLKYRYLDLRRPEMAERLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MSSEQVMEKTEQMMRGLFQDLLNVDLGDFPRMSYAEAMKRYGSDKPDLRNPLELVDIADL
VNNVEFAVFNGPANDVEGRVAALRIPTGASLSRKQIDDYTKYAGIYGAKGLAWMKINDLA
AGIEGIQSPVLKFLTEAIVNDIISRTGAQTADIILFGADKATVVEEAMGALRLKAGEDFK
LLEGEWRPLWVVDFPMFEQINGGFHAVHHPFTAPRGISAEQLAADPAVAISDAYDMVLNG
CELGGGSVRIHNAEMQSTVFGILGIEAEEANEKFGFLLEALRYGTPPHAGLAFGLDRIIM
LMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGIAVVEKVKTEE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgttaataagtctcatctaggtcaagaagtaacttta
gtcggttgggtaaaccgtagtcgagatttaggcggagtcgtatttttagacttacgcgat
agagaagggctagtgcaggttgtttatgacccagatctaaaagatgtttttgatatagca
agcacgttgcgcagtgaattttgtgttcaggtcaaaggggttgttagtgcccgtccagaa
agccaagtcaattcaaacatgaagactggcgaaattgaaattttgggtaagcaattgacc
attattaatgcttctgctccgttgccattgagcatggataattaccaaaataacagcgaa
gaacaacgtttaaaataccgttatttagatttacgtcgtccagagatggccgagcgtctt
atttttcgtgcaaaagtgaccagctcagtgcgtcgctttttagacagcaatggcttttta
gatatcgaaacgcctattttgactaaagccaccccagaaggtgcgcgtgactatttagtt
cctagccggacttataaaggtcagttttttgctttacctcaatcaccacagctgttcaaa
cagctgctaatgatgtctggttttgatcgctattaccaaattgtaaaatgtttccgtgat
gaagatttacgggcagatcgccagcctgaatttactcaaatcgatattgaaacttcgttt
atgtcttctgaacaagtcatggaaaaaactgagcaaatgatgcgcggtttattccaagat
ttattgaatgttgatttaggcgattttccacgcatgtcatacgcagaagcaatgaagcgt
tacggttctgataaacccgatttgcgtaacccgcttgagttagttgatattgccgattta
gttaacaatgtcgagtttgccgtttttaatggcccggcaaacgatgtagaaggccgcgta
gcagcgttacgtattccaactggcgcatcattatcacgtaagcaaattgatgactacact
aagtatgctggtatttatggcgctaaaggcttagcgtggatgaagataaatgacttagca
gcaggtatcgaaggtattcaatctccagtacttaagtttttaaccgaagctatcgttaac
gacattattagccgtactggcgcacaaaccgctgatatcattctatttggtgcagacaaa
gcgaccgtcgtggaagaagccatgggcgcgctgcgcttaaaagcaggtgaagatttcaag
ctacttgaaggtgaatggcgcccattatgggtggttgacttcccaatgtttgaacaaatt
aatggtggtttccacgccgttcaccatccatttaccgcccctcgtgggattagtgctgaa
caattggccgccgatcccgcggtggcaatttcagatgcctacgacatggtgttaaatggt
tgtgagttagggggtggttcagtacgtatccacaacgcagaaatgcaaagcacagtattt
ggcattttaggcattgaagcagaagaagcgaatgaaaaattcggattcttacttgaagca
ttacgttatggtaccccacctcatgctggtttagccttcggattagatcgtattattatg
ttaatgacaggggcaagctcaattcgtgacgtgatggctttccctaaaaccaccacagcg
gcgtgtccgttaaccaatgcgccaggatttgctaacccagttcaactcgctgagttaggc
attgctgtggttgaaaaggttaaaacagaagagtaa
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