Shewanella psychromarinicola: EGC80_15160
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Entry
EGC80_15160 CDS
T09848
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGC80_15160 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_15160 (uvrB)
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGC80_15160 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGC80_15160 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
Kinesin
AAA
AAA_22
Ish1
Motif
Other DBs
NCBI-ProteinID:
AZG36076
UniProt:
A0A3N4E3I5
LinkDB
All DBs
Position
3447851..3449872
Genome browser
AA seq
673 aa
AA seq
DB search
MSESVFSLESKFEPAGDQPTAIKKLVDGLASGVASQTLLGVTGSGKTYTIANVIKQMGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYMKMLLHLRQGDFIGQRDILIRLSEL
QYKRNDIELKRGTYRVRGEVIDIFPAESEREAIRIELFDDEIERLSEFDPLTGQINKRIV
RTTIYPKTHYVTPREKIIAATEEIKQELRERRQYLLDNNKLIEAQRITERVQYDIEMMVE
LGYCSGIENYSRYLSGRSTGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKM
NLVEYGFRLPSALDNRPLMFEEFERLMPQTIFVSATPSLYELEKSSGEIAEQVVRPTGLL
DPVLEVRPVGIQVDDLLSEIHKRVAVNERVLVTTLTKRMSEDLSEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGHFDVLIGINLLREGLDLPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAMDETDRRREKQHQHNIDNGIVPRGVVKSITDVMDV
GGTNFSKGTRKNHSKYAEVAEERAKYTSIADLSHQIDKLEKQMHEHAKNLEFEQAAAVRD
DVKHLRDLIIVNS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagtcagtattttccctagagtccaagttcgaacccgcgggcgatcaacctaca
gcgataaaaaaattagtggatggcctagcatcaggtgttgcgagtcaaacgttattaggc
gtaacaggatcaggcaaaacttacaccatagccaatgtcatcaagcaaatgggcaggccc
accattattatggcgcccaacaaaacccttgcggcgcaactttatggtgaaatgaaagag
tttttcccacataacgccgttgaatactttgtgtcttactacgattactatcaaccagaa
gcttatgtacccgcttctaatacctttattgaaaaagatgcatcggttaatgctcacatt
gagcaaatgcgtttatcggccactaaagcgttattagagcgtaaagacgtggtacttatt
gcctctgtgtccgctatctatggtttgggtgatcccgactcctacatgaaaatgctattg
catttacgccagggtgattttatcgggcaacgtgacattctcatccgactcagtgaatta
caatacaaacgcaatgacattgaattaaaacgcggcacatatcgtgttcgcggtgaagta
atagacatttttccagcagaatctgaacgagaagcgattcgaattgaattatttgacgac
gaaatagaacgcttaagcgaatttgatcccttgaccggacagattaataagcgaatagtt
cgcaccacaatttatccaaaaacacattacgtgactccgcgagaaaaaattattgcggcg
actgaagaaattaaacaagagttacgggaacgtcgtcaatatttactcgataacaataaa
ctgattgaggctcagcggatcactgagcgcgttcaatacgacattgaaatgatggtcgag
ttaggttattgctcagggattgaaaactactcgcgttatttatcaggccgatccactggc
gagggcccgccaaccttattagactatttgccggcagacggcttacttatcatcgatgag
tcacatgtgacggtgccgcaaattggggccatgtataaaggcgatagaagccgaaaaatg
aacttagtggagtatgggtttcgattaccatcagcattagataatcggccgcttatgttt
gaagaatttgagcggttaatgccgcaaaccatttttgtttcggcgacacccagcttatat
gaacttgaaaaaagttccggcgagatagctgagcaggttgtaaggccaacaggattgctc
gatcctgtgcttgaagttcgccctgtgggaattcaagttgacgatctcttgtctgagatc
cacaaacgcgtggcggtcaatgaacgtgtgttggtcaccacattaaccaaacggatgtca
gaagatctcagcgaatatcttgacgaacatggagtgaaggtgcgttatctgcattctgat
attgataccgttgagcgagttgagattattcgtgatttacgtctagggcattttgacgtg
ctgatcggaatcaacttattacgtgaaggtctggatctgcctgaagtctcattagtgtgc
attttagatgcagataaagaaggctttttacgttcagaacgctcacttatacagaccata
ggtcgcgctgcccgaaatgttaacggtaaagtcattttatatgcggatcgcatcaccaac
tccatggctaaagccatggatgaaactgatcgtcgccgtgaaaaacaacaccaacacaac
attgacaatggcatagtaccgcgaggggtagtgaaaagtatcacagatgtgatggatgtg
ggtggtactaacttcagcaaaggtacccgtaaaaatcactctaaatatgccgaagtggca
gaagagcgagcgaaatacaccagcattgccgatttgagtcatcaaattgataaactggaa
aaacaaatgcatgaacatgctaagaacttagagtttgagcaagctgcggccgtgcgtgat
gacgtcaaacatttacgcgatctcatcattgtaaatagttaa
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