Shewanella psychromarinicola: EGC80_15390
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Entry
EGC80_15390 CDS
T09848
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
EGC80_15390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
spsr03011
]
EGC80_15390
Ribosome [BR:
spsr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
EGC80_15390
Bacteria
EGC80_15390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AZG36119
LinkDB
All DBs
Position
3516692..3518359
Genome browser
AA seq
555 aa
AA seq
DB search
MTESFADLFEQSLETLEFRPGSIVRGTVVAIENGMVLVDAGLKSESPINADEFKNAQGVL
EIQVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDTLLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPESTRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKVNPWDDFATR
YNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEDAVSEYKKGDEIHAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGTVVHGTVSAVDAKGVTVELAETVEGYIRV
ADISSERIEDASTVYSVGNAIEAKFMGVDRKNRSISLSIKAKDEAEQKEAIATLNKQDEV
VMSSAMAEAFKAARK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcttttgctgatctatttgaacaatcccttgaaactttagagttccgtcca
ggttctatcgttcgtggtacagttgttgccattgaaaacggtatggtacttgttgacgcc
ggccttaagtctgaaagtccaatcaatgctgacgaattcaaaaacgcacaaggcgtttta
gaaattcaagttggtgatgaagttgacgtagcccttgactctgttgaagatggctttggt
gagactcaattgtctcgcgaaaaagctaagcgtcatgaagcttggatcgttctagaaaaa
gcgtacgaagatgctgaaactgtaatcggtatcatcaatggtaaagttaaaggtggtttc
actgttgaattaaacggtatccgtgccttcttaccaggttctctagttgacgtgcgccca
gttcgcgacaccgctcacttagagtacaaagaattagaattcaaagttatcaagcttgat
cagaagcgcaacaacgttgttgtttctcgtcgtgcagttatcgaatctgaaagcagtgct
gaacgtgatactcttcttgagaatctacaagaaggtcaagctgttaaaggtatcgttaaa
aaccttactgactacggtgcattcgtagacttgggtggtgttgacggtcttttacatatc
acagatatggcttggaaacgtgttaagcacccatctgaaatcgttaatgttggtgacgaa
atcaacgttaaagtacttaaatatgaccgtgagcgtactcgcgtatcattaggtcttaag
caacttggcgaagatccatggttagaaatcagcaagcgctacccagaaagcacacgtctt
actggtcgcgtaactaacttaactgactacggttgcttcgtagaaatcgaagaaggcgtt
gaaggtttagttcacgtttctgaaatggattggactaacaagaacattcacccatctaaa
gttgttaacttaggtgatgaagttgaagtgttagtactagacattgacgaagagcgtcgt
cgtatttctctaggcctgaaacagtgtaaagttaacccatgggatgacttcgcaactcgt
tacaacaaaggcgacaaagtatctggtaagatcaagtcaatcactgacttcggtatcttt
atcggtcttgacggtggaatcgatggtcttgttcacttatctgatatttcttggaacggt
actggcgaagatgcagtatctgaatacaagaaaggcgacgaaatccatgcagtggttctt
tcagtagacccagagcgtgagcgcatcagcttaggtgttaagcaaactgaagatgatcca
ttcaacgcatacttagctgacaagaagaaaggcaccgtagttcacggtactgtttctgct
gttgacgcaaaaggtgttacagttgaattggctgaaacagttgaaggttatatccgtgta
gctgacatctcttcagaacgcatcgaagatgcatctactgtatactcagtaggtaatgca
atcgaagctaagttcatgggtgtagatcgtaagaaccgttctatcagcttatctatcaaa
gcgaaagatgaagctgaacagaaagaagcgattgctactttgaacaagcaagatgaagtt
gtaatgagcagcgcaatggctgaagctttcaaagcggctcgtaagtaa
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