Shewanella psychromarinicola: EGC80_15395
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Entry
EGC80_15395 CDS
T09848
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsr03032
]
EGC80_15395 (ihfB)
03036 Chromosome and associated proteins [BR:
spsr03036
]
EGC80_15395 (ihfB)
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_15395 (ihfB)
DNA replication proteins [BR:
spsr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EGC80_15395 (ihfB)
Chromosome and associated proteins [BR:
spsr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EGC80_15395 (ihfB)
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EGC80_15395 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Glycos_trans_3N
ThiS
Motif
Other DBs
NCBI-ProteinID:
AZG36120
UniProt:
A0A3N4ECV4
LinkDB
All DBs
Position
3518437..3518724
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AA seq
95 aa
AA seq
DB search
MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLETGDRIEIRGFGSFSLHYRAPRM
GRNPKTGTSVDLEGKYVPHFKPGKELRERVDVVNP
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgaacttatcgaaaaactcgccactaggcagtcgcaactgtcggcgaag
gaagtggaaagtgcaatcaaagaaatgttggagcaaatggcaacaacattagaaaccggt
gatcgtatagaaatccgcggatttggtagtttttcacttcactatcgtgcaccacgtatg
ggtcgtaatccaaaaacaggcacctctgttgatttggaaggcaagtatgtaccgcacttt
aagccgggtaaagaactgcgcgaacgtgtcgatgttgttaatccttga
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