Shewanella psychromarinicola: EGC80_15775
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Entry
EGC80_15775 CDS
T09848
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00061
Fatty acid biosynthesis
spsr00071
Fatty acid degradation
spsr01100
Metabolic pathways
spsr01212
Fatty acid metabolism
spsr02024
Quorum sensing
spsr04146
Peroxisome
Module
spsr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EGC80_15775
00071 Fatty acid degradation
EGC80_15775
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EGC80_15775
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGC80_15775
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsr01004
]
EGC80_15775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsr04147
]
EGC80_15775
Enzymes [BR:
spsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EGC80_15775
Lipid biosynthesis proteins [BR:
spsr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EGC80_15775
Exosome [BR:
spsr04147
]
Exosomal proteins
Exosomal proteins of breast milk
EGC80_15775
Exosomal proteins of breast cancer cells
EGC80_15775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AZG36191
UniProt:
A0A3N4ECD1
LinkDB
All DBs
Position
3615454..3617118
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AA seq
554 aa
AA seq
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MEKIWLEKSYPPGVEFEIDPDKYNSLADLFLIYTKLYANNTAFINMDVSITYQQLEQQAT
DFAAYLQQDLGLVKGDKFAIMIPNTLQYPIALFGALIAGLTVVNVNPLYTARELEHQLKD
SGTKGILILENFAHVLQSVINKTDVKHVILTGVGDRLGMIKGALVNGAIKHVKKLVPAFD
LPNAIKFNDVMAKGSKLNLTPVEVVGADLAFLQYTGGTTGPSKGAMLTHRNMVANIEQSN
AVTKNVFEINKEIMITALPLYHIYALTSNCLAFLPFGGTNLLITNPRDMAGFVKELAKYR
FTVITGVNTLFNGLLNTPGFDKLDFSALKMGLGGGMAVQRPVAELWEKVTNSRLLEGYGL
TECAPLVTLSPYNQKSFNGSIGLPASSTDIRLVGADGEDVALGEPGEMWVKGPQVMKGYY
NRQKATDEVLIDGWLATGDIATMDENGFFKIVDRKKDMINVSGFNVFPNEIEEVLVMHEG
VLEAAAVGVSCDITGERVKVYIVRKDPTLTEQDILDHCNKMLTNYKRPKVVEFMNELPKS
NVGKVLRKDLRNKA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatttggcttgagaagagttatccgccaggggttgagtttgaaatagatcct
gataaatataattctttggcagatttattcttaatttataccaagttgtatgccaataat
actgcgttcattaatatggatgtcagcattacttatcagcaacttgaacaacaagcgacg
gattttgctgcttacttacagcaagatttaggcttagttaagggtgataaatttgccatt
atgatccccaatacactgcaatatcccattgcactatttggcgcactgattgcgggtctg
acggtggttaacgttaatccactgtataccgcccgcgagttagaacatcaattaaaagac
tctggcactaaagggatccttattcttgaaaactttgctcatgtattacagtctgttatt
aataaaaccgatgtaaagcatgtgatcctcacaggcgtaggtgacaggttaggtatgatt
aaaggcgcactcgtcaacggcgcaattaagcatgtaaaaaaactagtcccagcgtttgat
ttgcccaatgccattaaatttaatgacgtaatggccaaaggcagtaaacttaatttgacg
ccagttgaggttgtgggtgctgatttggcctttttacaatataccggtggtaccacaggc
ccatcaaaaggcgccatgctgactcatcgcaacatggtggccaacatagaacagtccaat
gcggttacaaaaaatgtcttcgaaataaacaaagaaattatgataaccgctttgccgctt
tatcatatctatgcgttaacttctaattgtttggcctttttaccatttggcggcactaat
ctattaatcaccaatccaagagatatggcaggttttgttaaagagctggctaaatatcgc
tttaccgttattactggggtaaataccttatttaatgggctactaaatacccctggattc
gacaaacttgattttagtgccttaaaaatggggcttggtggtggaatggctgtgcaacgt
ccggttgcagagctttgggaaaaagtcactaacagtcgacttttagaaggatatggatta
accgaatgtgcgcccttagtgacattaagtccttataaccaaaaaagtttcaatggctct
attggtttgcctgcatcatcaacggatattcgtttagtcggggctgatggtgaagacgtg
gcattaggcgagccgggcgaaatgtgggttaaaggtccacaagtgatgaaaggctattac
aatcgccaaaaagccaccgatgaagtcttaatcgatggttggttagcgacaggtgatatc
gccaccatggatgaaaatggttttttcaaaattgttgatcgaaagaaagatatgatcaat
gtttcaggttttaatgtatttccaaacgaaatcgaagaagtactggtgatgcatgaaggg
gtacttgaagctgccgctgtgggggtgtcgtgcgatatcactggtgagcgagtcaaagtg
tacattgttcgaaaagacccaacgcttaccgagcaagatatactcgatcattgtaataaa
atgctcaccaattataagcgacctaaagtagttgaatttatgaatgaattgcccaaaagt
aatgtgggtaaagtgttacgcaaagatcttcgtaataaggcgtaa
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