Shewanella psychromarinicola: EGC80_17775
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Entry
EGC80_17775 CDS
T09848
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGC80_17775
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsr01007
]
EGC80_17775
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_17775
Enzymes [BR:
spsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
EGC80_17775
Amino acid related enzymes [BR:
spsr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
EGC80_17775
Transfer RNA biogenesis [BR:
spsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EGC80_17775
Prokaryotic type
EGC80_17775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FlgN
Motif
Other DBs
NCBI-ProteinID:
AZG36522
UniProt:
A0ABM7C282
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All DBs
Position
complement(4071949..4073235)
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AA seq
428 aa
AA seq
DB search
MLDPKFLRNELDITAERLATRGFILEVDNLTKLEEKRKSLQVATEDLQASRNAISKSIGQ
AKARGEDTSSIMAQVGDLGAQLDAKKAELAELLQQINSIAMSMPNLPDESAPVGADENDN
VEVRRWGTPKVFDFEVKDHLDLGEALGGLDFKSAVKITGSRFIIMRGQIARLNRALGQFM
LDLHTTEHGYTETYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNYVRDMIVDESELPMKMTALTSCFRSEAGSYGRDTRGLIRQHQFDKVELVQIVHPDNSM
QALDEITANAEKVLQLLALPYRTMVLCTGDMGFSSSKTFDIEVWLPAQNTYREISSCSNM
KDFQARRMQARYRSKVDNKPALLHTLNGSGLAVGRTLVAVLENYQNQDGTITIPEVLRPY
MGGLSVIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctagatccaaaatttttgcgtaatgaactggacatcaccgccgagcgtttagccact
cgtggctttattcttgaagtcgataatttgaccaagcttgaagaaaagcgtaaatcgctt
caagtggctaccgaagacttacaagcctcgcgtaatgcgatatcgaagtcgattggtcaa
gctaaagcgcgcggcgaagacaccagttccattatggcgcaagtgggtgatttaggtgcg
cagttagatgcaaagaaggctgagcttgctgagttgttgcaacagatcaatagcatcgcc
atgagcatgccaaatttgccagacgaatcggctcccgtgggtgctgatgaaaatgacaat
gtagaagtacgccggtggggtaccccaaaagtattcgatttcgaagtcaaagatcatctt
gatttaggtgaagcgttaggtggattagattttaaaagtgcggtaaaaattaccggttca
cgttttattattatgcgtggccaaattgcccgtttaaatcgtgctttaggtcagtttatg
ctagacctacacaccactgaacacggctataccgaaacatatgtaccgctattggttaat
gaagacagtttattaggtacaggtcagttacctaaatttggtgaagatttattccacact
aaaccggccacagaagaaggccaaggtttatctcttatccccactgcagaagtgccatta
accaactatgtgcgcgacatgattgtggatgaaagtgaactgccgatgaaaatgaccgca
ttaacctcatgtttcagaagtgaagctggctcttacggccgtgatacccgcggattaatc
cgtcagcatcaattcgacaaagtagaattagtgcaaattgttcatccagataattcaatg
caagcgcttgacgaaatcaccgcaaatgctgaaaaagtattacagttactagcattaccg
taccgcaccatggtgttatgtactggtgatatgggctttagttcaagcaaaacctttgat
attgaagtctggttaccggcgcaaaatacttaccgtgaaatttcatcttgctcgaacatg
aaagatttccaagcccgtagaatgcaagccaggtaccgtagcaaagtcgataacaaaccg
gctttattgcacaccttaaatggctcaggtttggcggttggtcgtacgttagtggccgtg
cttgaaaactatcaaaatcaagatggcaccatcacaatacctgaagtattacgtccatac
atgggtggcttaagcgtgattggttaa
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