Shewanella psychromarinicola: EGC80_18100
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Entry
EGC80_18100 CDS
T09848
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00061
Fatty acid biosynthesis
spsr00071
Fatty acid degradation
spsr01100
Metabolic pathways
spsr01212
Fatty acid metabolism
spsr02024
Quorum sensing
spsr04146
Peroxisome
Module
spsr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EGC80_18100 (fadD)
00071 Fatty acid degradation
EGC80_18100 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EGC80_18100 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGC80_18100 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsr01004
]
EGC80_18100 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsr04147
]
EGC80_18100 (fadD)
Enzymes [BR:
spsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EGC80_18100 (fadD)
Lipid biosynthesis proteins [BR:
spsr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EGC80_18100 (fadD)
Exosome [BR:
spsr04147
]
Exosomal proteins
Exosomal proteins of breast milk
EGC80_18100 (fadD)
Exosomal proteins of breast cancer cells
EGC80_18100 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AZG36586
UniProt:
A0A3N4E8M6
LinkDB
All DBs
Position
complement(4142735..4144408)
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINNLPEHVPAEIDPSQFSSLVHMFEDSVAKYADQPAFINMGATITYRKLEERSRA
FAAYLQNELHLKKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLVDS
GAKAIVVVSNFAHTLEKIVVQTPIESVIITNLGDQLSAPKRTLVNFVVKYIKRLVPKYHL
PHALSFRDALSKGRRLQYIKADITGADLAFLQYTGGTTGVSKGAMLSHKNVVSNVLQANG
AYSPALDNGTEFVVTALPLYHIFALTVNCLLFLHKGSKNLLITNPRDLPAFVAELKKYPF
TVLTGVNTLFNALVNNEEFTQLDFSGLKLSIGGGMAVQRAVADKWQNLTKTRLLEGYGLT
EASPLVTCCPYNLSGYNGSIGFPAPSTFIQIRDEDSKVLAQGETGELYAKGPQVMLGYWH
RPEETATVIDKDGWLATGDIGYMDEKGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNDASGELVKIFVVAKDKSLTEEELIKHCRHHLTGYKVPKLVEFRDELPKT
NVGKILRRQLRDEVTKA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaataatttacctgaacatgttccggccgaaattgacccatct
caattcagttccttagtacatatgtttgaagattcagtagcaaaatatgccgaccaacct
gcctttattaacatgggtgcgacgatcacataccgtaaactcgaagaacgcagtcgagct
tttgcagcttatttacaaaacgaactgcatttaaaaaaaggtgatcgtgttgccctgatg
atgcccaatttgttgcaatatcctattgctctgtttggtgttttacgcgcgggtatggtg
gtggttaacgttaatccactttatactccgcgggaattaaagcatcaactagtcgattca
ggtgcgaaagctattgtagtggtgtcaaattttgctcataccttagaaaagattgtcgtt
caaacacctattgaatcggtcattattaccaatcttggtgatcaacttagtgcaccgaaa
cgcaccttagtgaattttgtcgttaaatacattaaaagattagtacccaaataccattta
cctcatgcattatcgtttcgcgatgccttatcaaaaggtcgtcgtctgcagtatattaaa
gcggatattacgggtgctgatttagcctttttacaatataccggtggcacaaccggggta
tctaaaggcgcaatgctaagccataaaaatgtggtgagtaatgttttacaggccaatggt
gcttactctccagcccttgataatggcactgagtttgtggtgacagccttgccgctgtac
catatttttgcccttacggttaactgtttgctgtttttgcacaaaggcagcaaaaattta
cttatcaccaatcctcgcgatcttcccgcatttgtggctgaattgaaaaagtacccgttt
accgtattgaccggtgttaataccttattcaatgctttggtgaacaatgaagaattcacc
caacttgatttttctggcttaaaactgtcgattggcggtggtatggccgtacaacgcgcg
gtcgccgataaatggcaaaatctgactaagacacgtttattagaaggttatggtttaaca
gaagcatcgcctttagtgacttgctgcccatataacctcagtggttataatggatcgatt
ggttttcctgcaccatcgacctttattcaaatcagggatgaagattcaaaggtattggct
caaggcgaaactggcgagttatatgctaaaggccctcaagtcatgctgggctattggcac
cgtccggaagaaacagctactgtaattgataaagatggttggttagcaacaggcgatatt
ggttacatggatgaaaaaggtttctttttcattgttgatcgtaaaaaagacatgatttta
gtgtcaggttttaacgtattcccgaatgaagtggaggaggtcgttgccttacaccctaaa
gtgattgaagtcgctgctgttggcgttcccaatgatgccagtggcgagttagtaaagatt
tttgtggtcgcaaaagacaaatcattaaccgaagaagagctgattaagcactgccgtcat
catttaacgggatataaagttcctaagctggtagaatttagagacgaattaccgaaaacc
aatgtgggtaaaattttacgccgacaacttcgagatgaagttaccaaagcgtaa
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