Shewanella psychromarinicola: EGC80_18915
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Entry
EGC80_18915 CDS
T09848
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03030
DNA replication
spsr03430
Mismatch repair
spsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGC80_18915
03430 Mismatch repair
EGC80_18915
03440 Homologous recombination
EGC80_18915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsr03032
]
EGC80_18915
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_18915
Enzymes [BR:
spsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGC80_18915
DNA replication proteins [BR:
spsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGC80_18915
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGC80_18915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
ResIII
AAA_7
AAA_2
AAA_assoc_2
AAA_18
PIF1
RCF1-5-like_lid
TsaE
Motif
Other DBs
NCBI-ProteinID:
AZG36726
UniProt:
A0A3N4E8N2
LinkDB
All DBs
Position
complement(4327574..4330408)
Genome browser
AA seq
944 aa
AA seq
DB search
MSYQVLARKWRPAKFEQMVGQSHVLMALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCETGVTANPCGECSSCIEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPHKLPVTVLSRCLQFNLKSLSQ
DEISKQLEYVITQEQLPFEPQALSLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTM
LGSIDEQHVLALLKALCDADVGPLMQTVAKVLAFGADAEEVLRSLLELLHQITLTQFAPA
AAQQSLFSEQILAFSQQLAPEQVQLYYQMLLNGRKDLAFAPDPKSGLEMALLRAVAFTPE
KQVKRWLTTTPANIDLSVIDGSSSPTQEVIETGPKSDLQPQKDIVLPTTALSIQDETAAT
TEVDVADAIDDEPVASSLVAEQALLLDQAQSLGFNPLPPKSDMPIGNVTNHVVKRDVSHM
TADKTAADIIHTAASDNGDIRADAETTTQITTAPLKRDIAASEERVEKHQLAQSTADSNV
VENSQLSGNADDIPLNAYAFMDYDVSDDMSMEYQPFDHDEEGAFSALNGTTEANNVDDVT
DSRSEPKTANHVSDNTRPNLTDSEDNVDDFLDEVLASRDSLIADVGVLQHKDELAKKEST
KITTSRVNKPAVTSVVSANESPAVTETDPKAFEALSTAETINSPVVADYDRAPWVAPEEG
EPINAFADVHDAIKPVTEATIQPTDTASHQQAAHAHNHAHKTSSLTAQSLNISAESVVRG
PTDATPIDVKAQFEPHSIQGNEIDLHWYKVMTNVSVGGRVRQLGVNSVCSALSNPMILVL
KPDQKHLSAQTAIDQLQDALSQYLGQPTQVQIQIGIVPKRETPLELRKRFHRELIAQAQQ
SILLDDNVQWMVQRLSAQLDSDSIEYPLEQLGQIAQDITQINAL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccaagtactcgcccgcaaatggcgtcctgctaaatttgaacaaatggttggt
caatcccatgtattaatggcattaactaatgcattgagccagcaacgtttacatcacgct
tacctctttaccggaacacgcggtgtgggtaaaaccagtttggcgcgtttatttgctaaa
ggtctcaattgtgaaaccggcgttactgctaatccttgtggtgaatgttctagctgcatt
gaaattgctcaaggtcgatttgttgatttaattgaagtcgatgcggcatcgcgtactaaa
gtcgatgatactcgtgaactccttgataatgtgcaataccgtccttcccgtgggcgtttt
aaagtgtacttaatcgatgaagtacacatgctgtcgcgtagcagttttaatgcattgcta
aagacgttagaagagcctcctgagcacgttaagtttttgctagcgactaccgatccgcat
aaactgcctgttactgtattatctcgttgcttacagtttaatctaaaaagtttgtcgcaa
gacgaaattagcaagcaactcgagtatgtgatcacccaagaacaattaccttttgagcca
caagcgctgagcttattagccaaagcggccaatggcagtatgcgtgatgcgctcagttta
actgaccaagcgatagcgtttggcagtggccaagtgatgctgacacaagtgcaaaccatg
ttgggcagtattgatgaacaacatgtgctggccttattaaaagccttgtgtgatgccgat
gttgggccattaatgcaaacggtagcaaaagtgttggcattcggtgccgatgctgaagaa
gtattgcgcagtttattagagttattgcatcaaatcaccttaactcagtttgcccccgct
gcagcgcaacaatcgctgtttagtgaacaaattctagcattctcacagcaattagcgcct
gaacaagtacagctttattaccaaatgttgcttaacggtcgtaaagatttagcctttgcc
cccgatcctaaatcgggcttggaaatggcgttacttcgcgcagtagcgtttacccccgaa
aaacaagtaaaacgctggctaacaacgacgccggctaacattgatttaagcgttattgac
ggttcatcatctccaacgcaagaggtcattgaaacaggcccaaagtctgatcttcagccg
caaaaagacattgttttaccgacaacagcattatctattcaggatgaaactgcagcgacc
acggaggtggacgttgctgatgctatcgacgatgagccagtcgcatcttcactggtggct
gagcaagctttgttgttggaccaagcgcaaagtttggggtttaatccattgccacccaaa
agcgatatgccgattggtaatgttaccaaccacgtcgtcaagcgtgacgttagccatatg
acagctgataagactgctgccgatattattcatactgcggcatcagacaatggcgatatt
cgtgctgatgctgaaacgacgactcaaatcacaacagcaccgctgaaaagggatattgct
gcgtctgaagagcgggttgaaaaacatcaattagcgcagagtactgcagacagcaatgtt
gtagaaaatagtcaattgagtggtaatgcggatgatattccgctcaacgcgtatgctttt
atggattatgacgtgtctgatgatatgtccatggaatatcaaccatttgatcatgacgaa
gagggggctttttcggctttaaatggaacaactgaagctaacaatgttgatgatgttact
gactcaaggtctgaaccgaaaacggctaatcatgtcagtgataatactcgcccaaacctc
actgattctgaggataatgtagacgattttcttgacgaagtgttagccagtcgtgattca
cttattgccgatgtcggggtgttacaacataaagatgaactggcaaaaaaagaatcgaca
aaaataaccacttcaagagtgaacaaacctgcagtgacatcggttgtcagcgccaatgag
tcgcctgcagtgactgaaactgatcctaaagcttttgaagcgttatctactgccgaaaca
atcaattctccagtagtggcagattatgatagggctccttgggtcgcgcccgaagagggt
gagccaatcaatgcatttgcagatgttcatgatgcgattaagcccgtcactgaagccact
attcaaccgacagacacggccagtcatcagcaagctgctcacgcacataatcacgcacat
aaaacgagctcattgacagcccaatcgctcaacattagcgcagagtctgtcgttcgaggt
cctactgatgcgacgcccatagatgtaaaagcccaatttgagccacacagtattcaagga
aacgagattgatttacattggtataaagtgatgactaatgtgtctgttggcggtagggtt
cggcaattaggggtgaactctgtgtgttcggcattgtcaaatcctatgatattggtgttg
aaacccgatcaaaaacatttgtctgcccagacagctattgatcaactgcaagacgcgtta
tctcaataccttgggcaaccgactcaagtacagatccagattgggattgtgcctaaacga
gaaacgccccttgagttacgtaaacgttttcatcgtgaacttatcgcacaggctcaacag
tctattttgcttgatgataacgttcagtggatggttcaacgcttatcggctcaattagac
agtgacagtattgaatatccgttggaacagctaggacaaattgcgcaggatattacacaa
attaacgctttataa
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