Shewanella psychromarinicola: EGC80_20255
Help
Entry
EGC80_20255 CDS
T09848
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr02020
Two-component system
spsr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EGC80_20255
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EGC80_20255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsr03021
]
EGC80_20255
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spsr02035
]
EGC80_20255
Transcription machinery [BR:
spsr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EGC80_20255
Bacterial motility proteins [BR:
spsr02035
]
Flagellar system
Flagellar assembly proteins
Stator
EGC80_20255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
HTH_10
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AZG36969
UniProt:
A0ABN5SSW6
LinkDB
All DBs
Position
complement(4668327..4669046)
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAAAYTQFDNKTSIVEQYAPLVKKIAHHMLARLPASVQLDDLLQAGMMGLLEASSKFD
DSKGAKFETFAGIRIRGAMIDEIRRGDWVPRSVHRNNRRVAQVVDELGQKLGRDAHDTEI
AEKLDMSLDEYHHILNDVSVGKIIGIEDLGVAQDVLITDNESPDETFDSLAEIQFQSALV
EAIKTLSERDALVLSLYYDEALNLKEIGAILDVSESRVSQILSQAMLRLKAKLKHWTQE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgcagcgtatactcagttcgataacaaaacatctattgttgaacagtat
gcaccgctggtaaaaaaaattgctcatcatatgctggcaagattaccagcatcggtgcaa
cttgatgacttattacaagctgggatgatggggttgcttgaggcctcatcaaaatttgat
gatagtaaaggggccaaatttgaaacctttgctggtatccgaattcgtggtgcaatgata
gatgaaattcgccgaggtgactgggttccacgctcagttcatcgtaataatcgccgggtt
gcacaagtggttgatgaattagggcagaaacttggacgtgatgctcacgatactgaaatt
gctgaaaaacttgatatgtcgcttgatgaataccatcacatcttaaatgatgtttctgtt
ggtaaaatcatcggtatagaagatcttggtgttgcgcaagatgtgttaatcacagacaac
gaatcgccagatgaaacctttgactcgcttgctgaaattcaatttcaatctgctttggtt
gaagcaattaagacattgtcagaaagagatgcgttagtgctgtcgttatattatgacgaa
gcattaaatttaaaagaaattggtgcaatccttgacgttagcgaatcgcgagtaagccag
atattaagtcaggcaatgctcaggttaaaagccaaactcaagcattggacacaagaataa
DBGET
integrated database retrieval system
