Shewanella psychromarinicola: EGC80_21135
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Entry
EGC80_21135 CDS
T09848
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K06194
lipoprotein NlpD
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
EGC80_21135
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
CHS4
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AZG37120
UniProt:
A0A3N4E9V0
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All DBs
Position
complement(4862070..4862999)
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AA seq
309 aa
AA seq
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MNTGWPHFLVLAIMLTGCSFQADRPAPVDSLSSNNHGPRYHKGSLKTNKYKVKKGDTLYS
IAWGAGRNFVDVARLNHLSSPYIIYPGQVLNLAATNNRPSTTVRAPQPYVTSVQTQAVTK
PYISSSNRSQLETIKPKDIPKPSPAVVSARTKKVLDHKVKPAYSVTTTQQTINQSAIGSV
ANLPQQVQQWHWPVRGRIVGYFSASEQGNQGIKIAGNRGDIIKAAADGRVVYAGNALRGY
GNLVIIKHNDDFLSAYAHADTILVKEKQYVSAGQTVAKMGSTGTNQVMLHFEVRFHGKSV
NPLRYLPKQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaataccggttggccacactttttggtcttagcaattatgctcactggatgcagcttt
caagctgatcgtcccgcgccggttgacagtttatcgtcaaataatcatggtcctcgttat
cataaaggctcattaaaaacgaacaaatacaaagtaaagaaaggtgacacgctttattca
attgcttggggggcagggcgtaattttgtggacgttgcccgtttgaaccatttatcgtct
ccttacattatttatcctgggcaagtacttaatttagcggccactaataatcgtccatcg
acaaccgttcgagcacctcaaccttatgttacttctgtacaaacacaagccgttaccaaa
ccatatatttcgagctcaaatcgttctcaattagaaacaatcaaaccgaaggatattcca
aagccaagcccagcagtagtttcagccagaacgaaaaaagttcttgatcacaaagtcaag
cctgcgtattctgtaacaactacccagcaaacaattaaccaaagtgcaataggttctgtc
gcaaatttgccacagcaagttcagcaatggcactggccagttagaggtcgaatagttgga
tatttttcggcatcagaacaaggcaatcaagggataaagattgctggtaaccgcggcgat
attattaaagccgcagcagatgggagagtcgtgtatgcaggtaatgcactgcgcgggtat
ggcaacttagtgattatcaagcataatgatgattttttaagtgcttatgcgcatgccgac
acgatactggttaaagaaaagcaatatgtgagtgcaggtcaaacagttgcaaaaatgggc
agtaccgggactaatcaagttatgcttcactttgaagtgcgctttcatggtaagtctgtc
aacccattacgatatctacctaaacagtaa
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