Shewanella psychromarinicola: EGC80_21240
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Entry
EGC80_21240 CDS
T09848
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00740
Riboflavin metabolism
spsr00790
Folate biosynthesis
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
spsr01240
Biosynthesis of cofactors
Module
spsr_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
EGC80_21240 (ribB)
00790 Folate biosynthesis
EGC80_21240 (ribB)
Enzymes [BR:
spsr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
EGC80_21240 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
EGC80_21240 (ribB)
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Lip_A_acyltrans
Motif
Other DBs
NCBI-ProteinID:
AZG37140
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All DBs
Position
complement(4886186..4887289)
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AA seq
367 aa
AA seq
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MALHNIEEIIEDIRQGKMVILMDDEDRENEGDLIMAADKVTPAAINFMATYGRGLICQTM
TKERCQQLNLPLMVTNNNAQFSTNFTVSIEAATGVTTGISAHDRAVTVQVAVAKDAKASD
LVQPGHIFPLMAQEGGVLTRAGHTEAGCDLARLAGCEPSAVIVEILNEDGTMARCPDLEI
FSQKHGIKIGTIADLIEYRNTNETTVVREAQCKLPTRFGDFTMVTFRDTIDNQLHYALVK
DEVKPNCLVRVHLQNTFNDLLHSERDQTRSWPLEKAMQRIALEGGVLVLLGNVEHSSQIL
AKVKAFEAEDNGQSPAGAMWQGTSRRVGVGSQILSSLGVSTMRLLSSPKRYHSLSGFGLE
VTDYIAE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacataacatagaagaaatcattgaagatattcgtcaaggtaagatggttatc
ttgatggatgatgaagacagagagaatgaaggtgatttgatcatggccgctgataaagtg
acgcctgctgcaatcaatttcatggcaacctatggccgcggattaatttgccaaaccatg
accaaagagcgttgtcagcagcttaacttgcctttaatggtcaccaacaacaatgcgcag
ttctcgactaactttaccgtatcaattgaagcggcgaccggggtcacaaccgggatctca
gctcatgaccgagccgtgaccgttcaagtcgctgttgccaaagatgccaaagcctctgat
ttagtacaacctgggcatatttttccgttaatggcacaagaaggcggggtattgacgcgt
gctggccatactgaagccggttgcgatttagcgcgcttagctggctgtgaaccttcagct
gtgattgttgaaattttaaatgaagacggcaccatggcgcgctgtcctgatttagaaata
ttcagtcaaaagcatgggattaaaatcggtaccattgcagacctaattgaataccgtaac
accaacgaaaccacggttgtacgcgaagctcaatgtaaactaccgactcgttttggtgat
tttactatggtgacatttagagacactattgataatcaattacactacgcattggttaaa
gatgaagtgaagcctaattgtttagtgcgtgtgcatttgcaaaatacctttaacgattta
ctgcattctgagcgagatcaaacgcgtagctggccattagaaaaagccatgcaacgcatt
gctttagaaggtggcgtattggtgttactgggtaacgttgagcattcaagtcagattctg
gcaaaagtgaaagcgtttgaggccgaagataatggccaatcaccagcaggagccatgtgg
caaggaacatcacgtcgtgttggcgtcggctcgcaaattctgtcgagtctaggtgtcagt
acaatgcgcttattaagttcgccaaagcgttaccattccttgtcaggttttggtttagaa
gtaacggattatatagctgaataa
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