Shewanella psychromarinicola: EGC80_21485
Help
Entry
EGC80_21485 CDS
T09848
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_21485 (truB)
Enzymes [BR:
spsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EGC80_21485 (truB)
Transfer RNA biogenesis [BR:
spsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGC80_21485 (truB)
Prokaryotic type
EGC80_21485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZG37182
UniProt:
A0A3N4EDV7
LinkDB
All DBs
Position
complement(4948075..4949028)
Genome browser
AA seq
317 aa
AA seq
DB search
MARRPKGRFIDGIVLLDKDTGMSSNFALQRVKRLFNANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLEADKRYLVTAKLGERTDTSDSDGEVVQTRPINITQELLDEKLAFFRGTTQQ
IPSMYSALKYQGQPLYKYAREGIEIPRESRPITVFELNFIKLESDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAEYPYEKMVTLAQLEALLEQAHRQDVAPKTLMDPLL
LPMDTAVANFAEINLPQAMLYYVMQGQAIQAAGLKPNELVRITIGDERRFVGIGTMNDDG
LLAPKRLIVIHDNDPTE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgccctaaaggtcgcttcatcgacggaatcgtattactcgataaagatact
ggcatgagttctaactttgccctgcaaagagttaagcgtctttttaatgccaataaagcg
ggtcatacaggtgctttagacccgttagcaacgggtatgttgcctatttgtcttggagaa
gcgacgaagttctctcagcatttattagaagcggataaacgctatctcgtgacggctaaa
ttgggtgaacgtactgatactagtgactcagatggggaagtcgtacaaacgcgccctatt
aacattacccaagaattacttgatgagaagcttgcgtttttccgaggaacgactcaacaa
ataccgtcaatgtattcggcattaaaataccaaggtcaacctttgtataaatatgcccgt
gagggaattgaaatcccacgtgagtcgcggcctatcaccgtatttgagttaaactttatt
aagcttgaaagtgatgaattaacgctagatattcattgttctaaagggacttacatacgg
accattattgatgatctaggtgaaatgcttggatgtggagcacatgttattatgttgcgt
cgtactcaagttgccgaatacccgtatgaaaaaatggttaccttagcacaattagaagcg
ttacttgagcaagctcataggcaagatgtagcgcctaagaccttgatggatccgttatta
ctgccaatggataccgcagtggctaatttcgctgaaattaatttgccacaagcgatgctg
tattacgttatgcaaggacaagcgattcaagctgcgggtcttaaacctaatgaattggtt
cgtatcactattggcgatgaacgtcggtttgttggtattggtaccatgaatgatgatggt
ttattagcaccaaaacgcttgattgtgatacacgacaatgatccaacagagtag
DBGET
integrated database retrieval system
