Shewanella psychromarinicola: EGC80_21500
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Entry
EGC80_21500 CDS
T09848
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsr03021
]
EGC80_21500 (nusA)
03009 Ribosome biogenesis [BR:
spsr03009
]
EGC80_21500 (nusA)
Transcription machinery [BR:
spsr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EGC80_21500 (nusA)
Ribosome biogenesis [BR:
spsr03009
]
Prokaryotic type
rRNA transcription factors
EGC80_21500 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AZG37184
UniProt:
A0A3N4EA13
LinkDB
All DBs
Position
complement(4952311..4953810)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKGLPREKIFEALEIALATATKKKYEGDIEVRVAIDRKTGHYDTFR
RWLVVDDQGQVLENPYSEITFEAARYEEPEIQVGEFIEDQIDSVAFDRIATQTAKQVIVQ
KVREAERAQIVEQFIEREGEIVTGVVKKSTRESVVVDLGNNADGVLFKEDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRSKPEMLIELFRVEVPEIYDELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVMWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDLNKKHQAESAKVI
DLFVDYLDVDKDFAAVLADEGFTSLEEVAYVPESELLAIEGFDEGIVEALRERAKAAIST
RALASEEALDGAEPSDDLLALEGLERHLAYVLASKGVVTLENLAEQGIDDLIDIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtcgcagaagcggtttccaatgagaaaggccttccgcgc
gagaaaattttcgaagcgctagaaattgcactggctaccgcaacaaagaaaaaatacgaa
ggcgatattgaagttcgtgtagccattgatcgtaaaacaggccattacgacaccttccgt
cgttggttggttgttgatgatcaaggtcaagttctggaaaatccatacagcgaaattacg
tttgaagccgctcgttatgaagaaccagagattcaagtgggtgagtttatcgaagatcaa
attgactcagttgcatttgaccgcatcgccactcaaaccgctaaacaagttatcgtgcaa
aaagtacgtgaagctgaacgtgcacaaattgttgaacaatttattgagcgtgaaggtgaa
attgttaccggcgtggtgaagaaaagtacacgagaaagtgtggttgtcgatttaggtaac
aatgccgatggtgtgttatttaaagaagatttaatcagccgtgaatctttccgtcctggt
gaccgtgtacgtgcattattgtactcagtacgtccagaggctcgtggcgcgcagttgttt
ttaactcgcagtaagcctgaaatgttaattgagctatttcgggttgaagtgccagagatt
tatgacgagttgatcgaagtcatgggtgctgctcgtgatccaggtgctcgtgctaaaatc
gcggttaaatcaaatgaccgtcgcattgaccctataggtgcttgtgttggtatgcgtggt
gcacgtgtgcaagccgtatcaaacgaattaggcggcgagcgagtggatattgtgatgtgg
gatgataatccggcacaatatgtgatcaatgccatggcgccagctgatgtagcatctatc
attgtggatgaagataaccattcgatggatatcgctgtagaagctgacagtttggcacag
gctattggccgtaatggtcaaaacgtacgtttagcgactcaacttactggttgggaacta
aacgtaatgaccgttgaagacctgaacaaaaaacaccaagccgaaagtgcgaaagtgatt
gacttgtttgtggattatctggatgtagataaagattttgcagccgttttggctgatgag
ggattcacttcgttagaagaagttgcttatgttccagaatctgaactattagcaatagaa
ggtttcgacgaaggaatcgttgaagcattacgtgaacgtgcaaaggcggcaatctcgaca
agagcattagcgtctgaagaagcgttagatggtgcagagccaagtgatgacttactagca
ttggaaggattagaaagacatttagcttacgttcttgcgagcaaaggtgtagtgacttta
gaaaacttggccgagcaaggtattgacgatttaattgatattgaagaattaacagaagaa
aaagcaggtgagctcatcatggctgcccgcaatatctgttggtttggcgaagaagcataa
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