Shewanella psychromarinicola: EGC80_21840
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Entry
EGC80_21840 CDS
T09848
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGC80_21840
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsr01007
]
EGC80_21840
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_21840
Enzymes [BR:
spsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
EGC80_21840
Amino acid related enzymes [BR:
spsr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
EGC80_21840
Transfer RNA biogenesis [BR:
spsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EGC80_21840
Prokaryotic type
EGC80_21840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AZG37244
UniProt:
A0A3N4DAQ5
LinkDB
All DBs
Position
5023601..5026513
Genome browser
AA seq
970 aa
AA seq
DB search
MEKTYNPKSIEQALYQNWEEQGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLTRYERMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKTRHNLGRDAFIDKVWDWKEQ
SGGTITKQLRRMGASVDWDRERFTMDQGLSKAVQEVFVRLYDDELIYRGKRLVNWDPKLH
TAISDLEVENKEKQGHMWHFRFPLAQGALTSDGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQSLIGKFVLLPIVNRLIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHQLPMYNI
FTLDACVRGFVEVVNTDGTPNKDVEIALPERYVGLDRFKARDAIVAEFDSLGLLEKVAPH
ALKIPYGDRSGVAIEPLLTDQWYVAVQSMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI
KDWCISRQLWWGHRIPAWYDENGKVYVGRNEAEVRAKHKFADSVVLRQDDDVLDTWFSSA
LWTFSTLGWPDNLEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLETLVAKRTGNMMQPQLAAKIEKSTRK
EFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEVQT
NPDSDEAGEPLDCGQLLVDGKPGAMELSLADRWIIGLFNQTVKTVEDHMAAYRFDLAANT
LYEFTWNQFCDWYLELTKPVMQNGTEAQMRGTRHTLVNVLEKMQRLMHPFMPYITETIWQ
RVKPLAGVTGDTIMLASFPTYQADQVDATAMADLEWVKQVIVAVRNIRAELNIAPSKPLN
ALLRDVSYEDRIRLEANQTFFTSLAKLESMTILAEGETAPMSTTQFVGNMELLIPMAGLI
DVGAELARIDKQLEKLAQEITRIEGKLSNQGFVAKAPAAVIDKERAKMADLTRDIEKLNE
QKIELAKIEA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatacaacccaaagtctatcgaacaggccctttaccaaaactgggaagag
caaggttacttcaagccgcatggcgatgaatctcaaggcaattattgcatcatgatcccg
ccaccgaacgtaaccggtagcttgcacatgggacatgccttccaagacaccatcatggac
acgcttactcgttatgaacgcatgaaaggtaagaataccttatggcaagtgggtaccgac
cacgctggtatcgccacccaaatgttggttgagcgtaaacttgaagccgaagaaggtaaa
acacgccataatttaggccgtgatgcctttattgataaagtgtgggactggaaagaacag
tctggtggcaccatcaccaaacaactacgtcgcatgggcgcatcggttgattgggatcgc
gaacgttttaccatggaccaaggcttatcaaaagcggttcaagaagtgtttgtccgtcta
tacgatgacgaacttatttatcgtggtaagcgcctagtcaactgggatccaaagcttcac
accgccatttcagatttagaagttgaaaataaagagaagcaaggccacatgtggcacttc
cgctttcctttagcccaaggggcattaactagcgatggtaaagactacctagaagtcgcc
accacgcgtcctgaaaccatgttaggtgacagcgcagtagccgtgcatccagatgacgaa
cgttatcagtcattgatcggtaagtttgtgctattacctatcgttaaccgcttaattcca
attgttgctgacgattatgtcgacatggaatttggcacaggctgcgtaaaaatcactcca
gcccatgactttaacgactatgaagttggcaagcgtcatcaactgcctatgtacaacatc
tttaccttagatgcctgtgtccgcggttttgttgaagtagttaataccgacggcacacca
aacaaagacgtcgaaattgcgctacctgaacgttatgttggccttgatcgttttaaagcc
cgtgatgctattgtggctgaatttgacagcttaggtttacttgaaaaagtcgctccgcac
gcgttaaaaataccttatggcgatcgctcaggcgtagcaattgaacccttattaaccgat
cagtggtatgtagccgttcaatcaatggcaaaaacagccattgaagccgtggaaaatggc
gacatcaagtttgtgccccagcaatacgagaatatgtacttctcgtggatgcgcgatatt
aaagactggtgtatttcacgccaactttggtggggacaccgtattccagcttggtacgac
gagaacggtaaagtctacgttggccgtaacgaagctgaagttcgcgctaaacacaaattt
gcagattctgtggtattacgccaagacgatgacgtattagatacctggttcagctcggca
ttatggaccttctcaaccttaggttggccagacaatttagaagatttaaaaaccttccac
ccaaccgatgtgttggtcacaggttttgatatcatcttcttctgggttgcgcggatgatc
atgatgaccatgcacttcattaaagatgaagacggcaaacctcaagtaccttttaaaacc
gtgtacgtgaccgggcttatccgtgatgaagccggtaataagatgtcaaaatccaaaggc
aacgtgcttgatccattagacatgattgacggtatcgaccttgaaaccttggtcgctaag
cggactggcaacatgatgcagccacaattggcggcaaaaattgagaaaagtacccgtaaa
gaatttgccgatggcattgaagctcacggtaccgatgcactgcgttttaccttagcggca
atggcatcaaccgggcgtgacatcaactgggacatgaaacgtcttgatggttaccgcagt
ttctgtaacaaattatggaacgcgtcacgttatgtgttaatgaacactgaagtgcaaacc
aatccagatagcgatgaagctggtgagcctttagattgcggtcaactgttagttgatggc
aaaccgggtgcgatggaattgtcgttagccgatcgctggatcattggtttgtttaatcag
accgtcaaaaccgttgaagatcacatggccgcttaccgttttgatttagccgctaacact
ttatacgagttcacttggaatcaattctgtgactggtatttagaattaaccaagcctgtt
atgcaaaacggcactgaagcgcaaatgcgcggcacacgccatacgttagtcaatgtgctt
gaaaaaatgcagcgtctaatgcatccatttatgccatacattaccgaaacgatttggcaa
cgcgtcaaaccgttagctggcgtaacgggtgataccatcatgctggcatcgttcccaacg
tatcaagcagatcaagtcgatgcgaccgcaatggcggatctggaatgggttaagcaagtc
attgtcgcagtacgtaatattcgtgctgaactcaatatcgccccgtctaagccgcttaat
gcgctgcttcgtgacgtgagctatgaagatcgcattcgtcttgaagcaaaccaaacattc
tttaccagtttggctaaacttgagtcaatgaccattttagcagagggtgaaacggcaccg
atgtcgaccactcagtttgtcggcaatatggagctattaatcccaatggcaggcttaatc
gatgtcggcgctgaattggcccgtatcgacaaacagcttgaaaagcttgctcaagagata
acccgcattgaaggcaaattatctaaccaaggctttgtcgctaaagcacctgctgcggtt
attgataaagagcgggcaaaaatggccgatttgactcgtgacattgaaaaattaaacgaa
caaaaaatcgaactggccaaaatagaagcataa
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