Streptococcus pseudoporcinus: NCTC13786_00278
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Entry
NCTC13786_00278 CDS
T07156
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spsu
Streptococcus pseudoporcinus
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsu03016
]
NCTC13786_00278 (truB)
Enzymes [BR:
spsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13786_00278 (truB)
Transfer RNA biogenesis [BR:
spsu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13786_00278 (truB)
Prokaryotic type
NCTC13786_00278 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF3686
Motif
Other DBs
NCBI-ProteinID:
VEF93008
LinkDB
All DBs
Position
1:complement(279066..279944)
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AA seq
292 aa
AA seq
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MNGIINVKKEAGMTSHDVVFRLRRLLREKKIGHGGTLDPDVVGVLPIAVGKATRVLEFMT
DAGKVYEGRVTLGFSTDTEDASGSLVEQTPVTRPLEEELVDEVMASFQGEIIQTPPMYSA
VKVKGRKLYEYARAGEEVERPQRQVTISEFKRTSPLIYENNLCHFSFKVACSKGTYVRTL
AVDLGQKLGYASHMSYLERTASAGLQLEDAFTLAAIDKMLTEDDHSFLLPIEYGVAELAK
LMISEQEAKELSFGRRIQLPSSEDSLAVFHQEQLVAIVEKCKEGYKPRKVFL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaattattaatgtcaaaaaagaagcaggaatgacgtcgcatgatgttgttttt
agattaagacgtcttcttagagaaaagaaaattggccacggtggaaccttggaccccgat
gttgtaggtgttttaccaattgcggtcggcaaagcgacaagggttttggagtttatgact
gatgctggcaaagtttatgaaggacgggtaaccttaggtttttcaacagatactgaagat
gcctcaggttctctagttgagcagacgccggtgaccagacctctggaagaggaacttgtt
gatgaggtgatggcgtcttttcaaggggaaattatccagactccacccatgtattcagct
gttaaagttaagggacgtaaattatatgagtatgcgcgtgcaggtgaggaagttgaacga
ccacaaagacaggttaccattagtgaattcaagaggactagtcctttaatctatgagaat
aatctatgccactttagttttaaagttgcttgtagtaaaggcacttatgtcagaacttta
gcggtcgatttgggtcaaaaactagggtatgccagccacatgtcttatttagaacgaacg
gcttctgcgggtttgcagcttgaagatgccttcactttggcagctattgataaaatgctt
acggaggatgatcattcctttttattacctattgaatatggtgttgcagaattagccaaa
ctaatgattagtgaacaagaagcaaaagaactgtcttttggtcgacgcatccaattacca
agttcggaagatagtttagctgtttttcatcaagagcaattagtcgctattgttgaaaaa
tgtaaagagggttataaaccgagaaaagtctttctctaa
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