Streptococcus pseudoporcinus: NCTC13786_00310
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Entry
NCTC13786_00310 CDS
T07156
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spsu
Streptococcus pseudoporcinus
Pathway
spsu03030
DNA replication
spsu03430
Mismatch repair
spsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13786_00310 (dnaE)
03430 Mismatch repair
NCTC13786_00310 (dnaE)
03440 Homologous recombination
NCTC13786_00310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsu03032
]
NCTC13786_00310 (dnaE)
03400 DNA repair and recombination proteins [BR:
spsu03400
]
NCTC13786_00310 (dnaE)
Enzymes [BR:
spsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13786_00310 (dnaE)
DNA replication proteins [BR:
spsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13786_00310 (dnaE)
DNA repair and recombination proteins [BR:
spsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13786_00310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
tRNA_anti-codon
HHH_6
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VEF93040
LinkDB
All DBs
Position
1:complement(310779..313889)
Genome browser
AA seq
1036 aa
AA seq
DB search
MFVQLDTKTVYSFMDSLIDLDHYISEAKRIGYQSIGIMDKDCLYAAYHFILKAQKAGLQP
ILGLAIEYPIQGKEESLYLLAKNNLGYQNLLKLSTLRMSAEFTPEHIKDFLDGLMVILPY
QPHLHGIELGFPYFTGVFEETKLVQPLPLQNLIPLRTVRYFSDSERETLQVLHAIRDNVT
LSETKVVEAGQYLKDPKEIAQKFEELYPGINDHLADLLKDIRYEFDHEFKLPRFNRQRAA
KEELKELTEDGLKKKGLWQDIYQERLEKELQIISDMGFDDYFLIVWDLLRFGRSKGYYMG
MGRGSAAGSLVAYALNITGIDPVKHNLLFERFLNKERYSMPDIDIDLPDIYRSEFLHYVR
NRYGSDHSAQIVTFSTFGAKQAIRDVFKRFGVPEYEISNLSKKIAFKDTLTSIYEKNISF
RQTINSRLELQKAFEIAKRIEGNPRQTSIHAAGIVMSDDLLTDHIPLKEGIEMMVTQYDA
PAVEANGLLKMDFLGLRNLTFVQKMKEKVAKDFGKDIIIEEIDLEDPKTLELFAKGDTKG
IFQFEQSGAISLLKRIKPKRFEEIVATTSLNRPGASDYTNNFIKRRRGQEKIDLIDPVIA
PILEPTYGIMLYQEQVMQIAQVFAGFTLGKADLLRRAMSKKNLAEMKKMENDFLEGAARL
GRSEETARLLFNRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFFDVIMNYSNSDY
ISDALESDFKVVPLTINNIPYNDKIDSNKIYMGLKNIKGLPRDLAYWIIEKRPFSSIESF
LSALPTKYQKKDLLEPLFAVGLFDLFESNRRKVLNNLDGLLIFVSELGSLFADSSFSWSD
CDDFSNREKYQLEENYIGIGLSPHPLLEIAEKTDQAFTPITKLLKDSEHTILVQIEKVRI
IRTKSSGQQMAFLTVTDTKKKIDVTVFPQEFLQFNYLLTEGQMVFIQGRVKERDNRLQIV
AQTITVANQKKYWILLDTHENDQRVAKILEEFTGQYPVVIHYQKTKETLQLNHILVDGSL
ELEEALKELVVKTVFR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtacaattagataccaaaacggtatattcatttatggatagtttaattgattta
gatcattacatctcagaagctaaaaggattggttatcaatcaattggtatcatggataaa
gattgtttatatgctgcttatcattttatcctaaaagctcaaaaagccggtttacagcct
attttaggattagcaattgaatatccaatccaaggcaaggaagagtctttatatctcctt
gctaaaaataatttaggctatcaaaacctcttgaagctttccactctgcggatgtcggct
gagtttaccccagagcacatcaaggattttcttgatggccttatggttatattaccttat
cagccacatttacacggtatagagcttggttttccttattttactggtgtttttgaggag
actaaattggttcagccgctccctctgcaaaatctaatacccttgcgaactgtgcggtat
ttttctgattctgaaagggagaccttgcaagtattgcatgctatccgagataatgtaacg
ttgtcagaaacgaaagttgtagaagctgggcaatatctgaaagatccaaaagaaattgct
caaaagtttgaggagctttatccaggtattaatgaccatttggctgatttattaaaagat
attcgttacgagtttgaccatgagttcaaattaccacgctttaatcgccaaagagcagct
aaggaagagctgaaggaattaactgaagatggtttaaagaaaaaaggactctggcaagat
atttatcaggaacgtttggaaaaggaacttcaaattatctcggatatggggtttgatgac
tattttttgattgtttgggatttactccggtttggacgtagtaaaggctattatatgggc
atgggccgtggctcagctgctggtagtttggttgcttatgctttaaatattactggaatt
gatcctgttaagcataatttactttttgagcgttttttaaataaagaacgctatagtatg
cccgatattgatattgatctaccggatatttatcgttctgagttcttacactatgttcga
aatcgttatggtagtgatcattctgctcaaattgtcactttttcaacttttggagctaaa
caggctattagagatgtctttaaacggtttggggttccagaatatgagattagcaatcta
agtaaaaaaattgcttttaaagacactttaacctctatctacgaaaaaaatattagtttc
cgccaaacgatcaatagccgtttagaattacaaaaagcttttgaaatagctaagcgaatt
gaaggcaaccctaggcaaacgtccattcatgctgccggaatagtcatgagtgatgatctt
ttgacagaccatattcctttgaaagaagggatagaaatgatggtgacgcagtatgatgcg
ccagcagttgaagcaaatggtcttttgaagatggattttctcggtttaagaaatttaaca
tttgtgcaaaagatgaaagagaaagtcgctaaggactttggtaaagacattatcattgaa
gagattgacttggaagatcccaaaacactcgaactctttgctaaaggagatactaagggc
atttttcaatttgagcaaagcggtgccattagtttactaaaacgcattaaacctaagcga
tttgaagaaattgttgcgacaacaagtttaaataggccaggggctagcgactatactaat
aatttcattaagcggagaagagggcaagaaaaaattgatttaattgatccggttattgct
cctattttagagccaacttatggtattatgctttatcaagagcaagttatgcaaattgca
caagtttttgccggttttaccttaggtaaagccgatctcttgcgcagggctatgtccaaa
aagaacctagcagaaatgaaaaaaatggaaaatgactttctggaaggtgctgctaggctt
ggtcgttctgaagaaacagctaggcttttatttaatagaatggaaaagtttgcaggttac
ggttttaacagaagtcatgcttttgcttattctgctcttgcttttcagttggcctatttc
aaggcacattatcctgcggttttctttgatgtcattatgaattactccaatagtgactac
atcagtgatgccttagaatcagattttaaagtggtaccattgaccattaataacattcca
tataatgataaaattgatagcaacaagatttatatgggcttaaaaaatattaaggggctt
ccacgtgatttggcttattggattattgaaaagcggcctttttcgagtattgaatccttt
ttaagtgccttaccaactaagtatcagaaaaaagacttgctggaacctttgtttgctgtt
ggtttatttgatctatttgagtccaatcgtaggaaagttttaaacaatctagatggatta
ctgatttttgtttcagaacttggctctctctttgctgattcctcttttagctggtcggac
tgtgatgatttttcaaatagggaaaagtaccagttagaagaaaattatattggtattggt
cttagtccacatcctttactggaaattgctgaaaaaacagaccaagcatttactccaata
acaaaacttcttaaagacagtgaacatactatccttgttcaaattgaaaaggtgaggatt
atccgcacgaaaagtagtgggcaacaaatggctttcttaactgtaactgataccaagaaa
aaaattgatgtcacggtatttcctcaagaatttttgcagtttaattatcttttgacagag
ggtcagatggtatttatccaaggaagggtaaaggaacgtgacaatcgtctacagattgtt
gctcaaacgattacagtagctaatcaaaagaaatactggattctccttgacacccatgaa
aatgatcaaagggttgctaaaattttagaggagtttacaggtcaataccctgttgttatt
cattaccaaaaaaccaaggaaacgcttcaattaaaccatattcttgtagatggtagttta
gaattagaggaggctcttaaagaattagtcgtgaaaacggtttttcgataa
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