Streptococcus pseudoporcinus: NCTC13786_00613
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Entry
NCTC13786_00613 CDS
T07156
Symbol
rlmCD_1
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spsu
Streptococcus pseudoporcinus
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsu03009
]
NCTC13786_00613 (rlmCD_1)
Enzymes [BR:
spsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC13786_00613 (rlmCD_1)
Ribosome biogenesis [BR:
spsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC13786_00613 (rlmCD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Methyltransf_25
Cons_hypoth95
MTS
PCMT
N6_N4_Mtase
RrnaAD
TRM5-TYW2_MTfase
PrmA
DOT1
Ubie_methyltran
Methyltransf_11
UPF0020
Motif
Other DBs
NCBI-ProteinID:
VEF93328
LinkDB
All DBs
Position
1:complement(627234..628595)
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AA seq
453 aa
AA seq
DB search
MLKKNDIVEVVIEDLSHQGSGIAKVDGFVFFVENALPTERITMRVLKLNKKIGFGKVEDY
LEKSPHRNENLDLAYLRTGIADFGHLAYEEQLLFKAKQVKDNLYKTAGIKAVELLPTIGM
EQPYAYRNKAQIPVRRVNGQLETGFFRKNSHDLLPISDFYIQDKEIDKLILFVRNLLRRF
QVSPYNEADQSGLIKNLVVRRGHYSGQMMLVFVTSRPKVFRVEQMVQLITEAFPQVVSIM
QNVNDQNSNAIFSKDFKVLYGQDYITDSILGNDYMISAQSFYQVNTVMAEKLYQTAIDFS
DLSADDVVIDAYSGIGTIGLSFAKKVKKVYGVEVIEAAVKDARKNAERNGIRNAEFLVGS
AEAAMEKWSKEGIKPSVILVDPPRKGLTESFIKASAAMAPKKITYVSCNPATMARDIKHY
QELGYNLIKAQPVDLFPHTHHVECIALIQRVKS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaaaaacgatatagttgaagtagttattgaagatttaagtcatcaaggctca
gggatagccaaagtggatggctttgtcttttttgtggaaaatgccttgccaacagaacgc
attactatgcgcgtattaaaactcaataaaaaaattggttttggtaaagttgaagactat
ctggaaaaatccccacatcgaaatgaaaatcttgaccttgcctatttgagaacgggtatc
gcagactttgggcacctagcttacgaagagcaactgcttttcaaagctaaacaagttaaa
gataatctctataaaacagctggtatcaaagcagttgagctattaccaactattggcatg
gagcagccctatgcctatcgtaacaaggcacaaatcccagtgagacgggtgaatgggcag
ttagaaacaggtttttttagaaaaaattcccatgatttattgcctatctctgacttttac
attcaagataaggaaattgataaactaatcctcttcgttcgcaacctcttacgccgcttt
caagttagtccttacaatgaagcagatcagtctggtttgattaaaaatttggttgtccgg
cgtggtcattattctggtcaaatgatgttagtctttgtcactagccgaccaaaagttttc
cgtgtagagcaaatggtccaactcattaccgaagccttcccacaagttgtctccattatg
caaaacgtcaatgatcaaaatagcaatgctatttttagtaaagacttcaaagtactctat
ggacaagactatatcacagatagcatcttaggcaatgattatatgatttccgctcaatcc
ttctatcaagtcaacaccgtcatggcggagaaactttaccaaacagctattgatttttca
gacttaagtgctgacgatgtggttattgatgcctattctggtatcggaactatcggcttg
tcctttgctaaaaaggtcaaaaaagtttacggtgtcgaagtgatagaagccgcagtcaaa
gatgctcgaaaaaatgctgagagaaatggcatccgcaacgcagaatttcttgtcggcagc
gcagaagcagccatggaaaaatggagcaaagaaggcatcaagccaagtgtcatcctagtt
gatccgcctcgcaaaggcttgacagaaagctttatcaaagcaagcgcagctatggcacca
aagaaaatcacctacgtgtcatgtaacccagctactatggcccgtgatattaagcactac
caagaactcggctacaatctcataaaagcccaaccagtggatcttttcccacatacccat
cacgtcgagtgcatagcgttgatacaaagagtgaaatcgtga
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