Streptococcus pseudoporcinus: NCTC13786_00845
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Entry
NCTC13786_00845 CDS
T07156
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
spsu
Streptococcus pseudoporcinus
Pathway
spsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC13786_00845 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsu03021
]
NCTC13786_00845 (rpoE)
03400 DNA repair and recombination proteins [BR:
spsu03400
]
NCTC13786_00845 (rpoE)
Transcription machinery [BR:
spsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC13786_00845 (rpoE)
DNA repair and recombination proteins [BR:
spsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC13786_00845 (rpoE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
VEF93544
LinkDB
All DBs
Position
1:complement(889014..889598)
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AA seq
194 aa
AA seq
DB search
MKLDIFAGQEKSELSMIEVARAILEERGRDNEVYFSDLVNDIQTFLGKSDADIRHALPFF
YTDLNTDGSFIPLGDNKWGLRSWYAIDEIDEEIITLEDEEDGSPKRKKKRVNAFMDGDED
AIDYSDDDPEDEDFTEETEDVEYDEEDPDDEKSEVESYDSELNEIIPEDDIEEVEINEEV
DEEEDDEEEDDEEE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattagacatatttgcgggacaagaaaaaagtgaattatcaatgattgaagtagcc
cgtgctattttagaagaacgtggtcgcgacaatgaagtgtattttagtgatttagtcaat
gatattcaaacttttttaggaaaatctgatgccgatattcgtcatgcgttgccatttttc
tacacggatttaaatacagacggatcattcattccgcttggggacaacaaatggggtcta
cgctcatggtatgccattgatgagattgatgaagaaattatcacgctagaagatgaagaa
gatggttcaccaaaacgtaagaaaaaacgtgttaatgcctttatggatggtgatgaagat
gcgattgattatagcgatgatgacccagaagatgaggactttacagaagaaactgaagac
gttgaatatgatgaagaagatccagatgatgaaaaatcagaagtggaatcttatgattca
gaattaaatgaaattatcccagaagatgatatcgaagaagtcgaaatcaatgaagaggtt
gatgaagaagaggacgatgaagaggaagacgacgaagaagagtaa
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