Streptococcus pseudoporcinus: NCTC13786_01109
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Entry
NCTC13786_01109 CDS
T07156
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spsu
Streptococcus pseudoporcinus
Pathway
spsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC13786_01109 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsu03021
]
NCTC13786_01109 (rpoA)
03400 DNA repair and recombination proteins [BR:
spsu03400
]
NCTC13786_01109 (rpoA)
Enzymes [BR:
spsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC13786_01109 (rpoA)
Transcription machinery [BR:
spsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC13786_01109 (rpoA)
DNA repair and recombination proteins [BR:
spsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC13786_01109 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
VEF93781
LinkDB
All DBs
Position
1:complement(1160197..1161135)
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AA seq
312 aa
AA seq
DB search
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNIKGLAVKSYVEDEKMIELDVEGPAEVTAGDILTDSDIELVN
PDHYLFTIAEGHSLKATMTVAKKRGYVPAEGNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKATDVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaacaataacaaaaattgatgaaaataaagattacggcaga
tttgtcatcgaaccattagaacgtggttacggaacaactctcggtaattcacttcgtcgt
gtactcttgtcttccttaccaggtgcggcagttacatcaatcaaaattgatggagtacta
cacgaatttgatacaatcccaggtgtacgtgaagacgtcatgcaaattatccttaatatt
aaaggacttgcagtaaaatcttacgtagaagacgaaaagatgatcgaacttgatgttgaa
ggtcctgcagaagtaactgctggagatattttaacagatagcgacattgaacttgttaac
ccagatcattatctctttactatcgctgaaggccattcgctaaaagcaactatgactgtt
gccaaaaaacgtggatatgtccctgcagaaggtaataaaaaagatgatgcacctgtagga
acattggctgtcgattctatctacacgccagttaaaaaagttaattatcaagtagaacct
gcccgcgttggtagtaatgatggctttgataaattaacaattgaaatcatgacaaatgga
acaatcatccctgaagatgcattaggtctgtctgctcgagttttaatcgaacacttgaat
ctctttacagacttaacagaagttgcaaaagcaacggatgttatgaaagaaactgaaaaa
gtgaacgatgaaaaagtacttgaccgcacaattgaggagcttgatttgtccgtacgctca
tataactgtctaaaacgtgcaggtattaacactgtatttgatttaacagaaaaatctgag
cctgaaatgatgaaagttcgcaaccttggacgtaaaagtcttgaagaagttaaggttaaa
cttgctgacttaggtttaggactaaaaaacgataaataa
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