Streptococcus pseudoporcinus: NCTC13786_01998
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Entry
NCTC13786_01998 CDS
T07156
Symbol
rexB
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spsu
Streptococcus pseudoporcinus
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsu03400
]
NCTC13786_01998 (rexB)
Enzymes [BR:
spsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13786_01998 (rexB)
DNA repair and recombination proteins [BR:
spsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC13786_01998 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
VEF94613
LinkDB
All DBs
Position
1:2024058..2027294
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AA seq
1078 aa
AA seq
DB search
MKLLYTDLHYSLTELLVAQADNYAQEGYRVFYIAPNSLSFEKERDVLEALRQEASFAITV
TRFGQLARYFTLNKVKTSLPIDDMTLSMIFYRALDQLTASDLKRYYHLKGDLAFILQLID
LYKELKGANIAVTELEMEDPEKKNDFISIFLAVEDLMARYQLDETSSLEQFSQVIASSQI
DDQLSQTVLIIDGFTRFSTEEANLVAQLDAKCRQVVIGTYLSPKAYSKNFTEGNIYQASI
DFFRELSQTYGVKAQYVKGQTIYPESFQKLTKLLEEHFDFSESENQLSSQDKESFQIWQS
LNQKDEIEHVAKSIRQKLYEGYRYKDILVLLGDLESYQLQIGQLFDKYEIPYYFGKAEAM
SHHPLVQFIDALERIYGYNWRNEDILSLLKTGLFSHVEDFDLDQFEAYVQFADINGSRKF
AKPFSLNPLDHRDRRKFDLEIINRVREVIYSPLRELYSQKEQTGASFLTGLLNFLKQVEL
PAKLEQLSYSQNENEQEKDLEVWKVFTTILEQFHHIFKDDIISLEHAFNLIKMGMQAANY
RVVPATLDVVTIKSYDLVQPHSKAFVYAIGMTSAHFPKVTLKKSLISDKERALTNQKLSS
FQRFEVASHETTKKNHFMALSLFNSANQELVLSVPMQLNEVSVELSPYISLLLDFGIPLL
EKGKSQFSAMETDIGNYKSLLSQVIELNTRQIELSSEEENFWTVMLRYLKGRLAKEDLVL
PQVKKHLQTKPLSQEVIQTRFPQEKPIHLSHSALTVFYDNQYKYFLQYILGLQEMESIHP
DARQHGTYLHRVFERVMADATDLAFDDKVKRAIEQTNQESSFKYFYQDDAQGRYSLHLLE
GIAKATADIFKTHQNVHVLAQEEKFQLPIKDKLIIKGTIDRIDQLVDQSVGIVDYKSSAS
AFDLSLFFNGLNSQLPTYLSALKRHYQNHIPIFGAMYLHMQEPTLDLASYPELDSKLLKD
HYKELTYKGIFMESEKEYLASGAYHITNNTFTEEEVAVLLAYNEWLYLRAEEKIRQGHFL
INPYTKDGKSVQGDQLKAITGFEADLDFGQARSLVTVFGKNKKETLLELMKDRQEGNQ
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatacagatttgcactattctttaacggaacttttagttgctcaggcc
gataactatgcccaagaagggtatcgtgttttttatatcgcaccaaattctctttcattt
gagaaagaaagagatgttttagaagctctcaggcaagaagcttcatttgccattacagta
actcgatttggccagttggctcgctattttacgctaaataaggttaaaacaagtttgcca
attgatgatatgactttatcaatgattttttaccgtgctttagaccaattaacagcatct
gatttaaagcgttattatcatctaaagggggatttagcttttatactgcaattgattgat
ttatataaagagcttaaaggggcaaatattgcagtaacagaacttgaaatggaagaccct
gaaaagaagaatgatttcatctcaatttttcttgctgttgaagacttaatggcaagatat
cagcttgatgagacaagttctcttgaacagttttctcaagtcatagcaagcagccaaata
gatgaccagcttagtcagaccgttcttattattgacggttttactcgtttctccactgaa
gaagctaatttagttgcgcaactagatgctaaatgtcgtcaggttgtcattggcacttat
cttagcccaaaggcttattcaaagaactttaccgaaggaaatatttatcaagcaagtatt
gatttttttcgtgaactttctcaaacttatggggttaaagcacagtatgttaagggtcag
acaatatatcctgagagttttcaaaaacttaccaagcttttagaggagcattttgatttt
tctgaatcagagaaccagttaagttcacaggataaagagtccttccaaatttggcaaagc
ctcaatcagaaagatgaaattgagcatgtggcaaagagcatccgtcagaaactctatgaa
ggttatcgttataaggatatccttgttctattaggtgatcttgaaagttaccaattacag
attggtcaactctttgacaaatacgaaatcccttattattttggtaaggcagaagccatg
tctcatcatcctctggtgcaatttatagatgcacttgagcgtatttatggctataattgg
cgaaacgaggatatcttgtccctattaaaaacaggtttatttagccatgttgaagatttt
gatctagaccaatttgaagcctatgtccaatttgctgatatcaacggttctcgcaagttt
gctaaacccttttctttgaacccgctagatcatcgcgaccgtcgcaaatttgatcttgag
attataaatagggttcgagaagttatttatagcccactaagagaattatatagtcaaaaa
gaacaaacaggcgcaagctttttgacaggcttgttgaactttttaaagcaagttgagttg
ccggcaaagcttgagcagcttagctattctcaaaatgaaaatgagcaagaaaaagatttg
gaagtctggaaagtttttaccactattttagagcaatttcaccacattttcaaagatgat
atcattagtttagaacatgcttttaaccttattaaaatgggaatgcaggcagctaattat
cgggtggtgccagcaactttagatgtcgttacgatcaaatcctatgacttagttcaaccg
catagtaaggcctttgtctatgctattgggatgactagtgcccattttccaaaagttact
cttaagaaaagtttaataagtgataaagaacgtgctttaaccaatcaaaaattatcttct
ttccagcgatttgaagtcgctagccatgaaacaactaaaaagaatcattttatggcactt
tcgctttttaattctgcaaatcaagaattagtgcttagtgtcccaatgcaattaaacgag
gtatcagtagagctatccccttatatttccttactgctagattttggcattcctttactt
gaaaaaggaaaaagccaattttctgctatggagactgacattggaaattataaatcactt
ttatctcaagtgattgaactaaatactagacagatagaactcagctcagaagaggaaaat
ttttggacggttatgttacgttatcttaaaggacgtttggcgaaagaagacttggtattg
cctcaagttaaaaaacatttacaaactaaacctctatcacaagaagtcattcaaacccga
tttccgcaagaaaaacctatccatttatctcattcagccttaaccgttttttatgataat
cagtataaatattttctacaatatattttaggtttgcaagaaatggagtcgatccatcca
gatgcacgtcaacatggaacttatttacaccgtgtgtttgaacgtgtaatggcagatgct
acagatctagcttttgatgataaagttaaaagggcaattgaacagacaaatcaagaatca
agtttcaaatatttttaccaagatgacgcgcaaggacgctatagtcttcaccttttagaa
ggaattgccaaagcgactgcagatatttttaagacccatcaaaatgttcatgtcttagcg
caggaagaaaagtttcagttgccaattaaggacaagttaataattaagggaacgatagat
cggattgatcagctggttgatcagagtgtaggcatagtagattataagtcaagtgctagt
gcttttgatttgtccctctttttcaatggtttaaactcgcagttgcctacttatttgtca
gctctaaaaaggcactatcaaaatcatattcctatttttggtgcgatgtatttgcatatg
caagagccaacacttgatttggcaagctatccagagttggatagtaaactattgaaagac
cactataaagagctcacctataaaggtatttttatggaaagtgaaaaagagtatttagct
tctggggcctaccatattaccaacaatactttcactgaagaagaagtggctgtcttgtta
gcctataacgagtggttatatttaagagctgaagaaaaaattcgtcaggggcattttctc
attaatccttacactaaggacggcaaatccgttcagggggatcaattgaaggccataact
ggctttgaggctgatttggatttcggacaagcaaggtccttagtaactgtttttggaaaa
aacaaaaaagaaacgttattagaattaatgaaagacagacaggaaggtaaccagtaa
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