Streptococcus pseudoporcinus: NCTC13786_02108
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Entry
NCTC13786_02108 CDS
T07156
Symbol
ssp5
Name
(GenBank) agglutinin receptor
Organism
spsu
Streptococcus pseudoporcinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AgI_II_C2
GbpC
Antigen_C
Adhesin_P1_N
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
VEF94718
LinkDB
All DBs
Position
1:2134184..2139079
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AA seq
1631 aa
AA seq
DB search
MTKTCNHHFLVNQEKGEKHVFRKSKKYRTLCSVALGTMVTAVVAWGGTVAHADEVTTSVD
TTIQRTENPATNLPEAQPNPVSEQTESMASTGQSNGAIAVTVPHDTVTQAVEEAKAEGVS
TVEDSPMDLGNTRSAVETNQQISKADADTQKQVETINEVTKTYKADKATYESNKARIEQE
NKELSQAYEGANQTGKETNAWVDTKVNDLKTRYADADVTVKEQVVSSGNGTSVLDYTNYG
KAVETIQSTNEQAVADYLTKKTKADDIVAKNQAIQKENEAGLAKAKADNEAIERRNQAGQ
AAVDAENRAGQAAVDQANQEKQQLVSDRAAEIEAITKRNKEKEAAARKENEAIDAYNTKE
MERYQRDLAEISKGEEGYISEALAQALNLNNGEPQAQHGAITRNPDQIISTGDALLGGYS
RILDSTGFFVYDMFKTGETLSFNYQNLQHARFDGKKISRVTYDITNLVSPAGTNAVKLVV
PNDPTEGFIAYRNDGNGDWRTDKMEFRVVAKYYLEDGSQVTFSKEKPGVFTHSSLNHNDI
GLEYVKDSSGKFVPINGSTVQVTNEGLARSLGSNRASDLNLPEEWDTTSSRYAYKGAIVS
TVTSGNTYTVTFGQGDMPQNVGLSYWFALNTLPVARTVTPYSPKPHVTVELEPIPEPITV
TPDIYTPKTFTPEKPVTFTPKPLDEVVQPSLTLTKVTLPVKPIPKELPTPPQVPTVHYHA
YRLTTTSEIMKEVVNSDQANLHEKTVAKDSTVIYPLTVDALSPNRAQTTSLIFEDYLPAG
YLFDKETTQKENGNYVLSFDETKNFVTLTAKENLLQEVNKDLTQVYQLTAPKLYGSVQND
GATYSNSYKLLLNKGTTNAYTVTSNVVTVRTPGDGETTTLITPDKNNENADGVLINDTVV
ALGTTNHYRLTWDLDQYKGDRSAKETIARGFFFVDDYPEEVLDVVENGTAITTLDGQKVS
GITVKNYASLNEAPKDLQDKLARAKITPTGAFQVFMPDDNQAFYDQYVQTGTSLALLTKM
TVKDSLYGQTKTYTNKAYQVDFGNGYETKEVTNTLVSPEPKKQNLNKDKVDINGKPMLVG
TQNHYTLSWDLDQYRGIKADNSQIAQGFYFVDDYPEEALLPDEAAIQFVTSDGKTVSGIT
VKSYSQLLEAPKTLQAAFSKQKIQPKGAFQVFMPEDPQAFFESYVTKGENITIVTPMTVL
ETMLNSGKSYENVAYQVDFGQAYETNTVTNFVPKVTPHKSNTNQEGISIDGKTVLPNTVN
YYKIVLDYSQYKDMVVTDDVLAKGFYMVDDYPEEALTLNPDGIQVLDKDGNRVSGISVST
YASLSEAPKVVQDAMAKRQFTPKGAIQVLSSDDPKVFYDTYVKTGQTLVVTLPMTVKNEL
TKTGGQYENTAYQIDFGLAYVTETVVNNVPKLDPQKDVVIDLSHKDASLDGKEVALHQTF
NYRLVGAMIPSNRATDLFEYGFEDNYDEKHDEYNGVYRSYLMTDVILKDGSVLKEGTEVT
KYTLQQVDTENGLVSISFDKSFLETVSDDSAFQADVYLQMKRIAAGQVENTYLHTVNGYV
ISSNTVVTHTPQPEEPSPNQPTPPQPPIETIEPPVPASILPNTGEQESLLGLIGAGILLG
TAYGLKKKEEK
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaacatgtaatcatcactttcttgtcaatcaggaaaaaggcgagaaacacgtc
tttcgcaagagtaaaaaatatcgcactctatgttccgttgcccttggaaccatggtgacg
gctgttgttgcttggggaggaacggttgcacatgccgatgaagttacaacttcagttgac
accaccattcaacgaacggagaatccagccacaaatttaccagaagcacaaccaaaccct
gtatctgaacaaactgaaagtatggcatcaactggacaatctaacggtgcgattgctgtt
accgtaccacatgatacggtaacacaagcagttgaagaagcaaaggctgaaggtgtttct
acggttgaagatagtccaatggatttaggaaatacaagatctgcggtagaaaccaaccaa
caaatttcaaaagcagatgcagatacccaaaaacaggttgagactattaatgaagtcact
aaaacctacaaagctgataaagcgacatacgaatcgaataaagctcgcatcgaacaggaa
aataaggagctgtcacaggcctacgagggggccaaccaaactggtaaagagacaaatgct
tgggttgatactaaagtcaatgacctaaaaactcggtatgcagatgctgatgtgacagta
aaagaacaagtagtttcatcaggaaatgggacatctgtccttgactatacaaactatggc
aaggctgttgaaaccattcaatcaactaacgaacaagctgtagcggattatctaacaaag
aaaacaaaggcagatgatattgttgcgaaaaatcaggccattcaaaaagaaaatgaagct
ggacttgctaaggcaaaggcagataatgaagccattgaaaggcgtaatcaggctggtcaa
gcagctgttgatgctgaaaaccgtgcaggtcaagccgcagtagatcaagctaatcaggag
aaacaacaattagtttcagatcgtgcagccgagattgaagctattacaaaacgtaataaa
gaaaaagaagccgcagccagaaaagagaatgaagcgattgatgcctataataccaaagaa
atggaacgctatcaacgtgacttggccgagatttcaaaaggtgaagaaggttatatttct
gaagcccttgctcaagccctcaatctcaacaacggtgaaccccaagcacaacatggggcc
attacccgaaatcctgatcagatcatttcaactggcgatgctttgctgggaggctactca
agaatattggattcaacaggattctttgtctatgacatgttcaaaacaggtgagactctt
agttttaactatcaaaatcttcaacatgcacgatttgatggtaaaaagattagtcgtgtg
acttacgatattaccaaccttgtatcaccagctggaaccaatgccgtgaaattggttgtg
ccaaatgatccaaccgagggttttattgcctatcgaaatgacggaaacggtgactggcga
acagacaagatggagtttcgtgtagttgccaagtattacttggaagacggttcacaagtt
accttctccaaagaaaagccaggagtcttcacacactcttccctcaatcataatgacatt
ggtttagaatatgtcaaagattcatctgggaaatttgtgccgattaatggttcaactgtt
caagtgactaatgaaggtctagcacgttctttgggttccaaccgtgcaagtgatttgaat
ttacctgaggaatgggataccacatcaagtcgttatgcttataaaggagctattgtctca
acagttacatcaggtaatacctacacagtaacctttggccaaggcgatatgccacagaat
gttggcttgtcatactggttcgccttaaataccctaccagtggcacgtacagtaacacca
tatagtcccaaacctcatgtaacggtggaacttgaacccattccagaacctattacggta
acaccagatatctatacaccaaaaacatttacaccagaaaagcctgtaactttcacacca
aagcctttggatgaagtagtgcagcctagtctaactttgaccaaggtaaccttgcctgtc
aaacctattccaaaagaacttccaacgccaccacaagtaccaactgtccattatcatgcg
taccgtttgacgacaacttcagagattatgaaagaagtggtcaatagtgaccaagctaat
cttcatgagaaaactgtcgcaaaagattcaacggtgatttatcccttaacagttgatgcc
ttatcgcccaatcgtgcccaaacgactagtctcatttttgaggactacttgcctgctggt
tacctatttgataaggaaacaacacaaaaagagaatggaaactatgtccttagctttgat
gagactaagaattttgtgaccttaaccgcaaaggaaaacttgttgcaggaggtaaataaa
gatttaactcaggtttatcaattgaccgccccaaaactctatggttctgttcaaaatgat
ggggcaacctattccaatagttacaaactccttttgaacaagggtacaaccaatgcttac
acagtcacttcaaatgttgtaacggttcgtacaccaggtgatggggagacaaccacgctc
attacaccagataaaaacaatgaaaatgcggatggtgtcctcattaatgacacggtcgta
gcccttggtacaaccaaccactatcgtttgacttgggatttggaccagtataagggagat
cgttctgctaaagagacaattgcacgaggcttcttctttgtggacgattacccagaggaa
gtgcttgatgtggtggaaaatggcacggctatcacaacccttgacggtcagaaggtatca
ggaattacagttaaaaactatgcttccctaaatgaagcccctaaagaccttcaagataaa
ttggctcgtgctaagattacaccgacaggtgcctttcaagtctttatgccggatgacaac
caagccttttatgaccagtatgttcaaacaggaacttctttagctcttttgaccaaaatg
acggttaaagatagtctctatggtcagacaaagacctatacaaacaaggcttatcaagtt
gatttcggcaatggctatgaaaccaaggaagtgaccaacacccttgtttcaccagaaccc
aagaaacaaaacctaaacaaggataaagtggatatcaacgggaagcccatgctagtggga
actcaaaatcactatactctttcatgggacttggaccaataccgagggattaaagcagac
aactctcagattgcacaaggtttttactttgtggatgattatccagaagaagctttattg
ccagatgaagcagctattcagtttgtcacatctgatggcaaaacagtttcaggaatcacg
gtgaagtcttattctcaattattagaagctcctaaaacgctacaagcagccttttccaaa
caaaaaattcagcctaaaggagcttttcaagttttcatgcctgaggacccacaagccttt
tttgaatcttatgtgaccaagggggagaatattaccattgtcactccaatgacggttttg
gaaaccatgcttaattcagggaagtcttatgaaaacgtggcttatcaggtggactttggg
caagcctatgaaaccaatacggtgaccaattttgtccctaaagtaactccacataagtct
aataccaatcaagaaggtatttcaattgatggaaagactgttcttccgaatacggtcaat
tattacaaaattgtcttggattacagtcaatacaaggatatggtcgtgacggatgatgtt
cttgccaagggattttacatggtagacgattacccagaagaagcccttaccctaaatcct
gatggcattcaagttttggataaggatggcaatcgtgtatctggtatctctgtcagcacc
tacgctagtttgtcagaagctccgaaagttgttcaagatgccatggctaaacgtcagttt
acacctaaaggagccattcaagttcttagtagcgatgatccaaaagtcttttatgatacc
tatgtgaagactggtcaaaccttagttgtcacgcttccgatgacggtaaaaaatgagttg
accaaaacaggtggtcagtatgaaaatacagcctatcaaattgattttggcttggcctat
gtcacggaaacagtggttaataatgttccaaaattagacccacaaaaagatgtggtgatc
gacttgtctcataaagatgccagccttgacgggaaagaagtggccttgcatcaaaccttt
aactatcgcttggttggagcgatgattccaagcaatcgtgcgactgatttatttgaatat
ggctttgaagataactatgatgaaaagcatgatgagtataatggtgtttatcgcagctat
ctgatgacggatgtcatcctcaaagacggttctgtcttaaaagaggggacagaagtcacg
aaatacaccttgcaacaggtagatacagaaaatggcctcgtgtcaatttcatttgataaa
tccttcttagagactgtctctgatgattcagcctttcaggcagatgtttaccttcaaatg
aaacggattgcggctggtcaggtggagaatacctatctccatacagtgaatggctatgtc
attagctcaaatacagttgtaacacatacacctcaacctgaagaaccaagtccaaatcaa
cccactccacctcaaccaccaattgagactattgaaccgcctgttccagcaagtattttg
ccaaatacaggggaacaggaatcccttttgggcttgattggagctggtattctacttggt
acggcttatggactgaagaaaaaggaggagaagtag
DBGET
integrated database retrieval system
