Shewanella psychrophila: Sps_00116
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Entry
Sps_00116 CDS
T05063
Name
(GenBank) flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
spsw
Shewanella psychrophila
Pathway
spsw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sps_00116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spsw02044
]
Sps_00116
02035 Bacterial motility proteins [BR:
spsw02035
]
Sps_00116
Secretion system [BR:
spsw02044
]
Type III secretion system
Flagellar export apparatus
Sps_00116
Bacterial motility proteins [BR:
spsw02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
Sps_00116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
AQS35337
UniProt:
A0A1S6HIK3
LinkDB
All DBs
Position
complement(120688..122400)
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AA seq
570 aa
AA seq
DB search
MSTTLAQPSPAITDVSEKSDLLSTARSKWQQFNNGDKQVLILAILASVVACVIVLLLWTA
SQGYRPLYGHQEKVETSEIIEVLEAEGIKYRLEANTGLVLVQEDKLGKARMVLAARGVKA
RVPSGMESLDNSSIGTSQFMEQAKYRHSLEGELSRTIMALKPVRTARVHLAIPKRTLFIR
QQPELPSASVMLDLYAGSNIQPNQIEAIANLIAASVTGMTPEHVQIVDQEGNHLSSGLAM
NQDITQARDRQLKYTQELEQSLISRASSMLTPVLGQENFQVQISAKVNFNQVEETRESLD
PQTVVSQEKQSTNETNSSMAMGIPGALSNQAPTANAEGDENGRRNLNQQESRQFEVGRSV
RHTRFQQMQLENLSVSVLLNTQAAGENGWSEAQLSQLEAMVQDAIGFTAMRGDQFSINSF
DFAPVQIAVFEPVPWWQTEGYQAYLRYFIGGLLGFGLILFVLRPLVSHLTRTAEPKTQQD
DATSIPELDSPSHSQLANKEQASDSQALADQLMGLDRDMSNSDWISNQGLPPPESPLTVK
MEHLSLLANQEPARVAEVIAHWIGDNENDK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaactttagctcaaccgagccccgctattacagatgtgtcagagaagagtgac
ttactctcgacggcaagaagtaaatggcaacagtttaacaacggcgacaagcaagtactg
attctggcaatacttgccagtgttgttgcttgtgtcatcgtgctacttctttggactgcc
agtcaaggatatcgcccactctatggtcatcaggagaaagttgaaacctctgaaattatc
gaagttctcgaagctgaaggcataaaatatcgactagaggcaaacaccggactcgtctta
gtacaagaagataagctaggaaaggcacgtatggtgttagcagccagaggtgtgaaagca
agagtaccatctggcatggagtcgttggataattcaagcataggcaccagccaatttatg
gagcaagctaagtatcgccatagtcttgaaggtgaactatccagaacaattatggcactc
aaaccggttcggacggctcgggtacatctagccattcctaagcgcaccctgttcatccgt
cagcagcctgaactaccgtcagcctctgtgatgttagacctttatgctggtagtaatatc
caacctaaccagatagaagcgatagctaacttaatcgcagcaagtgtcacaggcatgaca
ccagaacatgttcaaatcgttgatcaggaaggcaaccacctcagttcaggtcttgccatg
aatcaagacatcactcaggcaagagacaggcagcttaaatatacccaagagctggaacag
agtcttatcagccgcgcatcaagcatgcttactccagtgctgggccaggaaaattttcaa
gttcaaatttcggctaaagttaactttaatcaagtcgaagaaacccgcgaatctctggat
ccacaaacagtagtctcacaagaaaaacagagcacaaacgagaccaattcaagcatggcc
atgggaattccaggagccttgagtaatcaagcccccacagctaatgccgagggtgacgaa
aacggtcgccgtaatctaaaccaacaagagagtcgccaatttgaagttggccgctcggtc
agacacacgcgttttcaacagatgcagctagaaaacctctcagtctctgttttattgaat
acccaagccgccggcgaaaatggctggagtgaggctcagctttctcagcttgaggctatg
gtgcaagacgccattggttttacagcgatgagaggcgatcagttcagtatcaatagcttc
gactttgccccagtacaaatagcagtatttgagcctgtgccttggtggcaaaccgaaggc
tatcaagcctatctaagatactttatcggcggcctactcggctttggattaattctgttt
gtattgagaccacttgtgtctcacctaactcgaacagccgaacctaagactcagcaagat
gatgccacaagtatcccagagttagactcaccatctcatagtcagctagcgaataaggaa
caagctagtgactctcaagccctagccgatcagttgatgggactggatagagacatgtca
aacagtgactggatcagcaatcaaggtttaccaccaccagaatctccgctaacggtgaag
atggaacaccttagcttactcgcgaatcaggaaccggcgcgagtcgcagaagtgatagcc
cattggatcggcgacaacgagaacgacaaatag
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