KEGG   Shewanella psychrophila: Sps_00138
Entry
Sps_00138         CDS       T05063                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
spsw  Shewanella psychrophila
Pathway
spsw03030  DNA replication
spsw03410  Base excision repair
spsw03420  Nucleotide excision repair
spsw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sps_00138
   03410 Base excision repair
    Sps_00138
   03420 Nucleotide excision repair
    Sps_00138
   03440 Homologous recombination
    Sps_00138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spsw03032]
    Sps_00138
   03400 DNA repair and recombination proteins [BR:spsw03400]
    Sps_00138
Enzymes [BR:spsw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sps_00138
DNA replication proteins [BR:spsw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Sps_00138
DNA repair and recombination proteins [BR:spsw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Sps_00138
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sps_00138
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Sld7_N
Other DBs
NCBI-ProteinID: AQS35358
UniProt: A0A1S6HIM7
LinkDB
Position
complement(141828..144581)
AA seq 917 aa
MPKIAENPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYEPTQMAV
VFDAKGKTFRNDMYEDYKAQRPPMPDDLRTQIEPLHRIIRAMGLPLVCISGVEADDVIGT
ISTQASKEGRAVLISTGDKDMAQLVDENVTLINTMTNTIMGPEEVTEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTAVAMLTGAGGIDKILAAPEKMPELGFRGAKTMPAKLAEHG
DILKLSYELATIKLDVELEQDWQELNIKPADRDEMIKCFGEMEFKRWLAEVLDNKSGSSK
GEDTADEETSKQDIKTEYTTIYTHEELDLWIDKLANAELIAIDTETTSLNYMEAKLVGIS
FAIEAGKAAYLPLAHDYLDAPEQLDQAEALAKLKPLLENPELKKVGQNLKYDISIFANVG
IKLQGIAFDTMLESYVFNSVASKHNMDDLALKYLGHKNISFEEVAGKGVKQLTFNQIDLE
TAAPYAAEDADITLRLHHHLWPRLEKEPELASVFTDIELPLIQILSDIERRGVLIDSMML
GQQSEELARSIDELEQQAFEIADEKFNLSSPKQLQALFFEKLGYPIIKKTPKGAPSTAEE
VLVELALDYPLPKIILQHRSLAKLKSTYTDKLPLMVNAQSGRVHTSYHQANAATGRLSSS
EPNLQNIPIRTEEGRRIRHAFIAREGKKVLAADYSQIELRIMAHLSQDKGLLTAFAAGKD
IHRATAAEVFDVDFDEVTTEQRRRAKAVNFGLIYGMSAFGLAKQLDIPRPEAQKYIDTYF
KRYPGVLKYMEETRAEAADLGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTA
ADIIKKAMINIAHWIATETQGEIDMIMQVHDELVFEVDSDKAVEMQEKICQLMADAVSLD
VELLAEAGIGDNWEQAH
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcctaaaattgccgaaaatccgttagttctagtagatggctcctcctatctttatcgt
gcctattatgcaccaccacatcttaccaattctaagggtgaagccaccggcgctgtttat
ggcgtaattaacatgttacgcagcctgctcaaccagtatgaaccgactcaaatggcggta
gttttcgatgcgaaaggtaaaaccttccgtaacgacatgtacgaagattacaaggcccag
aggccgcctatgccagatgatcttcgcactcagatagaacctctccatagaataatacgt
gctatgggattgcctctggtatgtatttccggagtcgaggcggacgatgttatcggcaca
atctcaacccaagcgagtaaagagggcagagccgtacttatcagtactggcgataaagat
atggcccagctcgtcgatgagaatgtcacgctgatcaacacaatgaccaataccatcatg
ggaccggaggaagtcaccgaaaaatttggtgtcggacccgagctcattatcgacttatta
gccctacagggtgacaaggccgataatattcccgggcttcctggtgtaggcgagaaaaca
gccgtagccatgctaaccggtgctggcggcatagataagatcctagccgctccggaaaag
atgcctgaactaggcttcagaggcgctaagaccatgccggctaagcttgccgagcacggc
gatatactcaagttatcctatgagctggcaacgattaagttagatgtcgaactcgaacaa
gactggcaagagctcaatatcaagccggcagaccgagatgaaatgataaaatgtttcggt
gaaatggaatttaaacgttggttggccgaagtactcgataataaatctggctcgagtaaa
ggtgaagatacagccgatgaagaaacttctaagcaagatataaaaaccgaatacaccact
atatatacccatgaagaattggatctttggatagataaactcgccaatgcagagctcatc
gccatagacactgagaccaccagtctcaactatatggaagccaaattagtcggtatctcc
ttcgcaatagaagcgggcaaggcagcctatcttccattagcccacgactatttagatgca
ccagaacaactggatcaagctgaagccttagcaaaactcaagcctctactggaaaatccc
gagctaaaaaaagtaggacaaaatcttaaatacgacatcagtatttttgccaatgtgggc
attaagctgcaaggcatagccttcgatactatgctcgagtcctatgtcttcaattcagtc
gcatctaagcacaacatggatgatctggcacttaaatacctaggtcacaaaaatatcagc
ttcgaagaggttgcaggcaaaggtgtcaaacagctgaccttcaatcaaatcgacctagaa
accgcggctccttacgcagccgaagacgccgatattaccctcagattgcatcatcattta
tggccaagattagagaaagagccggaactggcttcggtatttaccgatattgagctgcca
ctcattcaaatactgtcagatattgagcgcagaggcgttttaatagatagcatgatgcta
gggcaacagagtgaagagctcgccagaagcatagatgagttagagcaacaagctttcgaa
atcgccgatgagaaattcaatttaagttcacctaagcagcttcaagcactatttttcgag
aaattgggctatcccattattaagaagacacctaaaggtgccccctccactgccgaagaa
gtattagtcgaattagccttagattatccgctacccaagatcatactccaacacagaagc
ttagctaagctaaagagcacctacactgacaagttacccctcatggtcaatgctcagagt
ggccgagtgcacacgagttatcatcaggccaatgcggctactgggcgtctctcttccagc
gagcctaacctgcaaaacatcccaattcgtacggaagagggtcgcagaatccgtcacgca
ttcatcgcacgtgaaggcaagaaggtactcgcagcagattactcacaaatcgaattgcgc
atcatggctcacttgtctcaagataagggattactcacagctttcgccgccggtaaagat
attcacagggcaaccgcagccgaagtattcgatgtggacttcgatgaagtcactacggaa
caacgccgtcgcgccaaagcggtaaacttcggactcatttatggcatgtcagcatttggc
ctcgctaagcaattagatattcctcgccctgaggctcaaaagtatatcgacacttacttt
aaacgttacccgggtgtgctcaagtatatggaagagactcgcgcagaagcggcagatctt
ggttacgtctcgacgctctatggtcgcaggctatatctaccagcgattaaagataggaat
gccatgagacgccaggcagctgagcgagcagcgattaatgcgcctatgcaaggcactgcc
gccgatatcatcaagaaggccatgatcaacatagcccattggattgctaccgagactcaa
ggtgagatcgacatgatcatgcaagtgcacgatgaactcgtgttcgaagtcgacagcgat
aaggcggttgaaatgcaggagaaaatttgtcagctaatggccgatgcggtcagcctggat
gtcgaactccttgcagaagctggaataggtgataactgggaacaggctcattag

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