Shewanella psychrophila: Sps_00145
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Entry
Sps_00145 CDS
T05063
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00540
Lipopolysaccharide biosynthesis
spsw01100
Metabolic pathways
Module
spsw_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sps_00145
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spsw01005
]
Sps_00145
Enzymes [BR:
spsw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Sps_00145
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Sps_00145
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Sps_00145
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Sps_00145
Lipopolysaccharide biosynthesis proteins [BR:
spsw01005
]
Lipid A
Sps_00145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
AQS35365
UniProt:
A0A1S6HIM4
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All DBs
Position
150456..151742
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AA seq
428 aa
AA seq
DB search
MNRFCYSALLYLLLPLLVLYLAIRGIKSVDYRGRWGERFGLTSLRQSDLLIHCVSMGETL
AAVPLIKAIQKVFPQLTITVTTTSPTGSAEVIKAFGDSVQHCYLPFDISICVRRFLKQVA
PKSCIIMETELWPNLVHQASKSGVKLMLANARLSEKSARKYRKQTTLTLPMLHSLDRIAA
QSELAAARFIDLGVKPENISVCGSLKFDITISADNIEQAKALRREWQKIDCPIWVAGSVH
PGEFEAILNAHRQVLADKPDTLLIMVPRHPEQFNAAASKISDAGLNLARRSLNESVQSNT
QVLLGDTMGELLTFYGAADQAFVGGTLIDNGGHNPLEPAALGLPVFVGPQHWDFAEIAGL
LESAGALKVIASGSELACELIGKFNDSSAYEAASEAGLKVVTANRGALKQQFELAKQLID
SQEGRKIH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttttgctattccgccttgctatatctgttactaccgttgttggtgttgtat
ttagccatacgtgggataaagagcgttgattatcgaggccgatggggtgagaggtttggc
ctgacatcgcttaggcaaagcgatctgttaattcattgtgtgtccatgggggagacattg
gcggcagtgcccttgattaaagcgattcagaaagtatttccccagttaacaatcactgtg
acgaccactagccctaccggttcggccgaagtgataaaagcctttggtgatagtgtgcag
cactgctacttacccttcgatatctcaatctgtgtcaggcgttttctcaaacaggtcgcg
cctaaatcttgcatcatcatggagacagaactctggcctaatctggttcatcaggcatcg
aagtctggagtgaaattgatgttggcgaacgcccgtttatctgaaaaatcggcgagaaaa
tatcgaaaacaaaccacactgaccttgcccatgttacatagcctagatcgaatagcggct
caatcagagctggctgcggcgcgttttatcgatttaggcgtcaaaccagaaaatatcagt
gtctgtggcagcctaaagttcgatatcaccatatcggcagataacattgagcaagcaaaa
gcattgcgccgggagtggcagaagatcgattgtcctatttgggttgcaggtagtgtgcac
cctggggagttcgaagcgatcttgaatgctcatcgtcaggttttagcggataagcctgat
actttgcttatcatggtcccccggcatccagagcagtttaatgccgccgcaagtaagatt
tctgatgctggattaaatttagctcgtcgaagcttaaatgagtcagtccagtcaaatact
caagtactattaggcgatactatgggggagctactcaccttctatggcgccgcggatcaa
gcctttgtcggtggcaccttgatcgataacggtggtcataacccattggagcctgcagca
ttgggcctaccggtattcgttggtccacagcattgggatttcgctgaaatagcaggtttg
ctcgaaagtgccggagcattgaaggtaattgcttcgggtagtgaactcgcctgtgagttg
ataggtaagttcaatgatagctcggcctatgaagctgccagcgaggctgggcttaaggta
gtcaccgctaatagaggcgcgctgaagcagcagtttgagctggcgaaacagttgatcgac
tcacaagaagggagaaaaattcattag
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