Shewanella psychrophila: Sps_00701
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Entry
Sps_00701 CDS
T05063
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00260
Glycine, serine and threonine metabolism
spsw00460
Cyanoamino acid metabolism
spsw00630
Glyoxylate and dicarboxylate metabolism
spsw00670
One carbon pool by folate
spsw00680
Methane metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
spsw01230
Biosynthesis of amino acids
spsw01240
Biosynthesis of cofactors
spsw04981
Folate transport and metabolism
Module
spsw_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sps_00701
09102 Energy metabolism
00680 Methane metabolism
Sps_00701
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sps_00701
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sps_00701
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sps_00701
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Sps_00701
Enzymes [BR:
spsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sps_00701
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Helic-prim_T7_N
Motif
Other DBs
NCBI-ProteinID:
AQS35895
UniProt:
A0A1S6HK28
LinkDB
All DBs
Position
754298..755563
Genome browser
AA seq
421 aa
AA seq
DB search
MFDYRNKIKEFDAVVDKAIQKEKVRQEAHIELIASENYASPMVMEAQGTSLTNKYAEGYP
GRRYYGGCEHVDEIEALAIERAKELFGADYANVQPHSGSQANAAVFMALVEPGDTVLGMS
LAHGGHLTHGSHVSFSGKSYNAVQYGINDAGEIDYDEVTALAHQHQPKMIIAGFSAYSQI
IDWARFRQIADEVGAYLFVDMAHVAGLVAAVQYPNPLPHAHVVTSTTHKTLRGPRGGLIL
SLNHPELEKKLNSAVFPGVQGGPLMHVIAAKAVAFKEALLPEFACYQAQVVRNADVMART
LIERGYDVVSGGTRNHLFLLSLIKQGLTGKEADAALGQASITVNKNAVPNDPQSPFVTSG
LRIGSPAITTRGFKEEECRQLSTWIADILDALQTEDASTVIAEVKNKVSLLCGDYPVYRG
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatcgtaataagattaaagagttcgatgctgtggttgataaagccattcaa
aaagaaaaagtacgccaagaagcgcacatcgaactaattgcttctgaaaactatgccagt
ccaatggtgatggaagcacaaggaacatcactgacaaataaatatgccgaaggttaccct
ggacgtcgttattatggtggatgtgagcatgttgatgaaatagaagcattggccatcgag
cgggcgaaagaactctttggcgctgattacgccaacgtgcaaccgcattcaggttctcag
gctaatgcggcagtatttatggcattagttgaacccggagatacagtattaggcatgagt
ttggctcatggtgggcacttaacccatggttcccatgtgagcttttctggaaaatcttac
aatgcggttcagtacggtatcaatgacgctggcgaaattgattacgatgaagtgactgct
ttggctcaccaacatcagcccaaaatgatcattgccggattttcagcttactctcaaatc
atcgactgggctcgctttcgtcaaatagccgatgaagtcggagcctatctttttgtcgat
atggcccatgttgcaggccttgttgctgctgttcagtatccaaatccactgcctcatgct
catgtcgttacatcaacaactcataaaactctacgtgggcctcgtggtggtttaattttg
agcctaaatcatcctgagttagagaagaagctcaattcagccgtctttcctggtgttcag
ggagggcctttaatgcatgttattgcggctaaggctgtggcatttaaagaagcgctactt
cctgaatttgcatgctatcaagcgcaggttgttcgtaatgccgatgtgatggctcgcaca
ttgattgaacgtggctatgatgtggtttccggtggtacccgtaatcatttattccttctg
agcctcattaagcagggcctcacaggcaaagaggctgatgcagccctgggccaggcttca
atcacggtaaataaaaatgctgtgcctaatgatccccaatccccctttgttacttcagga
cttcgtattggttcacctgcaatcacaactcgaggttttaaagaagaagagtgtcgtcag
ctgtctacttggatagcggatatattggatgctctgcaaactgaagatgccagtactgtg
atcgcagaggtgaagaataaagtaagcctgctttgtggtgactatccggtctaccgtggt
cagtga
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