Shewanella psychrophila: Sps_00812
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Entry
Sps_00812 CDS
T05063
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsw03032
]
Sps_00812
03400 DNA repair and recombination proteins [BR:
spsw03400
]
Sps_00812
Enzymes [BR:
spsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sps_00812
DNA replication proteins [BR:
spsw03032
]
Prokaryotic type
DNA Topoisomerases
Sps_00812
DNA repair and recombination proteins [BR:
spsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sps_00812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AQS36004
UniProt:
A0A1S6HKH5
LinkDB
All DBs
Position
895289..898003
Genome browser
AA seq
904 aa
AA seq
DB search
MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYTLIDGQGNFGSVDGDAAAAM
RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTEFIPEVMPTRIPTLLVNGSSGIAVGMAT
NIPPHNLTEVIKGCLALIEEPALSIEQLMDYIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRSKAEVQVEDNGRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARDRAHILESLAIALANIDPIIAMIKASPTPAEAKVKLVAQGWELGHVK
AMLEKAGDDAARPEWLEPEYGIRDDHYYLTEQQAQAILDLRLHKLTGLEHEKILAEYEEL
IEIIAALLYILRSPERLMEVIKEELNEVLENFGDERRTVINANEVDMSLEDLINEEDVVV
TLSHLGYAKYQPLTDYQAQRRGGKGKSAAKVKDEDFVEKLLVANTHDTILCFSDFGKLYW
LKVYQLPLASRQARGRPIVNLLPLSEGEHITAILPVREYADDKYIIMATSHGTVKKTALT
AYSNPRANGIIAVNLKDGDELIGVDITDGKNDIMLFSDAGKVVRFNEMVRDSETGLVKLD
PETNEELVALRPMGRTATGVRGIRLEDGQKVVSLIVPKEDGAILTVTENGYGKRTALDEY
PAKSRATKGVVSIKISDRNGPVVGAVQVGENDEIMLISDRGTLVRTPATGVSTIGRNTQG
VTIIRTAEGEKVVGLQRIDEIQEDEVELDEEGNPIIQEGDNAETGQVEGEDPKGDDEPEA
EPAE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctataacaccaattaatattgaagacgaattaaaaaattca
tatctagattacgccatgagcgtgatcgtgggccgtgcactaccggatgttcgtgacggt
cttaagcctgttcatcgccgcgtactcttcgcgatgagtgaacttaaaaacgattggaac
aaaccctataagaaatcggcacgagttgtcggtgacgttatcggtaagtaccacccccac
ggtgatacagcggtttatgacactatcgttcgtctggctcagcctttctccatgcgttac
accttaattgacggccaaggtaacttcggttctgtcgatggtgatgctgcggcggcgatg
cgttataccgaaatccgtatggataagttagctcatcagctattggcagatcttgagaaa
gagaccgtcgactttgtgcctaactatgatggtactgagtttattccagaagtgatgcct
acacgtataccgacactcttggtcaacggttcttcgggtattgccgtcggtatggcgaca
aatattccgccacataaccttactgaagtgatcaaaggttgtttagcgctaatcgaagag
cctgcactgtccattgaacagttaatggattacattccaggtcctgatttccctactgct
gctattatcaatggccgcaaaggcatcatcgatgcctataagacgggccgtggacgcgca
gtgatgcgttctaaggctgaagttcaagtagaagataatggccgtgagcgcattatcgtc
cacgaaattccttatcaggtgaacaaggctcgtcttatcgagaagatagccgagctggtt
aaagataagaagattgaaggcatcagcggtctgcgtgatgaatctgataaagatggtatg
cgcatcgttatcgagatcaaacgtggagaggtgggtgaagttgtacttaacaacctgtat
gcacagactcagatgcaatgctcgttcgggataaacatggtggctttgaccaacggtcag
ccaaaactgtttaacctaaaagagatgttagagtgctttatcttacaccgccgtgaagtc
gttacccgccgtaccgtatttgaattgcgtaaggctcgtgatcgtgcacacatattagaa
tcactcgccattgccttggctaacattgatcctattattgccatgatcaaggcgtctcca
acgccagctgaagccaaagttaagctggttgcccaaggttgggagctaggtcatgttaaa
gccatgcttgaaaaagcaggtgatgatgcggcgcgtcctgaatggctagagcctgagtat
ggtattcgtgacgatcactattaccttaccgagcaacaagcacaagctatcttagaccta
cgcttacataagctaactggtcttgagcatgagaagatattagccgagtacgaagagctg
attgagatcattgcggcattactctacatattacgcagccctgaacgcttaatggaagta
atcaaggaagagttaaacgaagtacttgagaacttcggtgatgagcgtcgtactgtcatt
aatgcgaatgaagttgatatgagtcttgaagatcttatcaacgaagaagacgtcgtggtg
accttatcgcacttaggctatgccaagtatcagccattaaccgattaccaggctcagcgt
cgtggtggtaaaggtaagtcagcagcaaaagtgaaagatgaagacttcgtcgagaagcta
cttgttgctaatacccatgatacgattctgtgtttctctgatttcggtaagctctactgg
cttaaagtgtatcagttgccgctcgctagccgtcaggctcgtggtcgtccaatcgttaac
ttactgcctctttctgaaggtgagcatattactgctatccttcctgtgcgtgaatatgcc
gatgacaaatacatcatcatggcgacctcacacggtacagtgaagaagactgcactcacg
gcatacagtaatccacgtgctaacggtattatcgctgtgaaccttaaagatggcgatgag
cttatcggcgtcgatattaccgatggcaagaatgacatcatgttgttctccgatgcaggc
aaagtggttcgtttcaacgagatggtgagagactctgaaactggtctggttaaacttgat
ccggaaaccaacgaagagctagttgcactgcgtcctatggggcgtaccgctaccggtgtt
cgtggtatacgtcttgaagatgggcagaaagtcgtttcactgattgttccgaaagaagac
ggtgcaatcctgacggttaccgagaatggatacggtaagcgtactgcactcgatgagtac
ccggccaagagccgtgcgactaagggggttgtctctatcaagatcagcgatcgaaatggt
ccagtagttggcgccgttcaagtgggtgaaaatgatgagatcatgcttatcagtgataga
ggtactttagttcgtacccctgcaacgggtgtttccactatcggtcgtaatactcaaggt
gtgacgataattcgtaccgccgaaggggagaaggtagtcggtcttcagcgtatcgatgaa
atccaagaggatgaagtcgagctcgatgaagagggtaaccctatcatccaagaaggtgat
aacgccgaaactggtcaggtcgaaggtgaagatccgaaaggtgatgatgagccagaggct
gaacctgctgaataa
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