KEGG   Shewanella psychrophila: Sps_01010
Entry
Sps_01010         CDS       T05063                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsw02044]
    Sps_01010
Secretion system [BR:spsw02044]
 Type III secretion system
  Type III secretion core apparatus
   Sps_01010
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Yop-YscD_ppl_3rd Yop-YscD_ppl_1st Y4YQ_C
Other DBs
NCBI-ProteinID: AQS36199
UniProt: A0A1S6HL14
LinkDB
Position
complement(1118143..1119348)
AA seq 401 aa
MSSKYKILWLNGPLQGRELSLPLGCMSIGPDGDVLATLVELSQLDLCIDDAGVHLQSEVS
TWIDGKPVGKLDFLPLGRVIEFAGIAMVLGGADDVLRMQAIPKRGQSKSTMSYWMLVIAS
LLIFTLLMSVLLVPSSPPQTVQTPSQWLSQQLIQDGLKDVRASWSSSGIVTLSGYCTDAQ
QITGFFSDLKNNGILFVDHTQCGDQLISNVKGVLSQNGFPDAIVELGHELGSVNISGAIR
SGEAWDKAVDGFNHLPGLLSWHVSNQVNRQLKPLIVKLREKQLLSGLMVARVKNSIVITG
KISEEKQQLVMSVARQLEQSHPSGFKLVFQNIPVRDELAQMLSAPVVSFGGNAKSPFIEL
SNGMRLSAGSKLENGFMINYMNIHGLDLTRGGELIHIPLIF
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgtcttcaaaatacaagatcttatggttaaacggtcccttgcaggggcgggagctatct
ctgcctctaggctgcatgagtattggtccagatggggatgtactcgcgaccttggttgag
ttaagccagctggatctgtgtatcgatgatgccggggtacaccttcagagtgaagtgtca
acttggatcgatggtaagccagtcggcaagttagatttcctaccattaggccgagtcatt
gagtttgccggtatcgctatggtgctggggggagcagacgatgtgcttaggatgcaagca
atacctaagcgggggcaatctaaatcgacaatgtcatattggatgctcgtgattgcctct
ttgcttatcttcactttgctaatgagtgtgctcctggtgccaagctcaccgccacaaact
gtacagacaccgagtcagtggctatcacaacagcttatccaagatggcctcaaagatgta
agagccagctggtcaagctcagggattgtcaccttaagtgggtattgcactgacgcgcag
cagataacgggtttcttcagtgacctaaaaaataacgggattttatttgtagatcacact
caatgcggcgatcaactcatcagtaatgtaaagggagtgctgtctcaaaatggctttcct
gatgcgattgtcgaactgggtcatgaactgggcagcgtcaatatctctggagctattcga
tctggtgaggcttgggataaggcggtcgatggctttaaccacttaccgggtctgttgagt
tggcatgtgtccaatcaagttaataggcaattaaaacccttgatagtcaaactcagggag
aaacaactgcttagcggattaatggtggcacgagtgaaaaactcgattgtgatcactggc
aagattagtgaggagaagcagcagctggtcatgagtgtggcaaggcaactagagcagagt
cacccgagcggatttaagttggtatttcagaatattccggtacgagacgaactcgcacag
atgttaagtgcgccggttgttagctttggaggtaatgctaaatctccctttattgagctc
agcaatgggatgaggttatcggccggaagcaaattagagaatggctttatgattaattac
atgaatattcatggactggatttaactcgcggtggtgagttaatacatatcccattaatt
ttttaa

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