Shewanella psychrophila: Sps_01025
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Entry
Sps_01025 CDS
T05063
Name
(GenBank) RHS repeat protein
Organism
spsw
Shewanella psychrophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF4595
DUF2729
Motif
Other DBs
NCBI-ProteinID:
AQS36214
UniProt:
A0A1S6HL36
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All DBs
Position
complement(1133376..1135388)
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AA seq
670 aa
AA seq
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MNAFDLNARTVSSEGCSTQAEHIDMATGYVLERRTDFTLSGRFPLLHKRFYHSGRMMSPG
LLGTRWRCWWDMSLQCDGASVTFTDEQYNQGVYTLPIAGSESRFPPLPQWRLLRRGDDLL
MRHVDGLSYRFGHAFGDKLLLSRISDGKGNELTFTYHGAVLSHIILADGRQIRVDTHLGR
IKQLTLLTPQALPIQTLVRYEYNPLGYMTSCRAGPGESFDYRYSRNGFLLRSSDLSLTWL
EFDYDVKGRALAIRGAEERFNAQLRYDDEQGVVYYKSLFHGFRQYHIDDQNNISRIVFSN
GDETANEWRDNCLIAQINARRESCHFSYNDFGQVTAMSILDDKIWEYSYDDSGRLTQYIN
SKGEVWSYRYDNKGNLVSVSDPFLMQWFYQYTSLGQLAWVISPDTSQTGYRYNRLGQLVT
ILLADGGTVVFYYDGLGRLVKRCQTLADGSKEGRQFWQYKSGMPHPCAWVDEDGLQANFT
YDVTGHLIGVTNSQGLKHDYEYGAFDTLITHSTPQGRNFYQYNHNCQLISVSEDKQIADS
SLYFHSHQGQAVQAMTTQQVVSQQSITVFAYDAVGRLESKTLADGTSVHFYYDAIGCLVQ
QQSRTKEGRVATNITHECDEVVHQLRVLSPDAALTFEYEKLMVPQTRLSRHPKLKESIYE
LGLNKIAVEV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatttgatttgaatgcacgaacggttagtagtgaaggctgcagtacccaagca
gagcatatcgacatggccacaggttatgtgcttgagcggcgcaccgactttaccctttca
gggcgattccctctgctgcataaacgtttttatcattcaggcagaatgatgagcccaggg
ctgcttggcacccgttggcgctgttggtgggatatgagcctgcaatgtgacggggcgtcg
gtgacttttaccgatgagcaatataatcagggcgtgtacaccttaccgatagcgggaagc
gaaagccggtttccccctctgcctcaatggcgattattgcgccgtggtgatgatctgttg
atgaggcacgtcgatggccttagttatcgctttggtcacgcctttggtgacaagttgctt
ctttctcgtattagtgatggtaagggcaatgagctaactttcacctatcatggcgcagtc
ctgagtcatattatcttggccgatggccggcagatccgggtggatactcatttgggccgc
atcaagcagctgaccttactcacaccacaagcgctgcctatccaaaccttggttcgatac
gagtataatccgcttggctatatgacctcttgtcgtgcagggcccggcgagagttttgat
tatcgttacagcagaaatggttttctattacgaagttctgacttgagtctcacctggctt
gaatttgattatgatgtaaagggacgcgctcttgctatacgtggtgccgaggagcgtttt
aatgctcaacttagatacgatgacgagcaaggtgttgtgtattacaagagtctgtttcat
gggttcaggcaatatcacatagatgatcaaaacaacatctctcgcattgttttttccaat
ggtgatgaaacggccaatgagtggcgggacaattgccttatcgctcaaatcaatgcccgg
agagagtcttgtcatttttcctataatgattttggccaagtgacggcaatgagtatcttg
gatgataaaatctgggagtatagctacgatgactcgggacgattgacgcaatacataaat
tcaaagggtgaggtatggtcataccgatatgataataaaggcaaccttgttagtgtatcc
gatccttttcttatgcagtggttttatcaatacaccagtttgggtcaattggcttgggtc
atctcaccggatactagccaaactggttatcgctacaaccgattaggtcagttagtgact
attttgcttgctgatggtggaactgtcgttttttactacgatgggctcggccgattagtt
aagcgatgtcagactttggccgatggaagtaaagagggtcgtcaattctggcagtataag
tcaggcatgcctcatccctgtgcctgggttgatgaagatggcctgcaagctaattttact
tacgatgtaacagggcacttaatcggtgtgacgaactcccaagggctcaagcatgattat
gagtatggcgcattcgataccttgataactcatagcactccacaggggcgaaacttttat
cagtataatcacaattgccagctcattagtgtgagtgaagataagcaaattgcagattca
tctttgtattttcattctcaccaagggcaagctgttcaggcgatgacaactcagcaagtt
gtgtctcaacaaagcattactgtattcgcttatgatgctgtgggcaggctcgagagcaaa
accttagccgatggtactagtgtgcatttttattatgatgctatcgggtgcttagtgcag
caacagagccgtactaaagaggggagagtcgctaccaatatcacccatgagtgtgatgaa
gtcgtacatcagcttagggtcttgagcccggatgcagcattaaccttcgaatatgaaaaa
ctcatggttccccaaacaagattatcaagacacccaaagttaaaagagtcaatttatgag
ctaggcttaaataaaatagctgttgaggtttga
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