Shewanella psychrophila: Sps_01120
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Entry
Sps_01120 CDS
T05063
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00030
Pentose phosphate pathway
spsw01100
Metabolic pathways
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
Module
spsw_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Sps_01120
Enzymes [BR:
spsw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
Sps_01120
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AQS36302
UniProt:
A0A1S6HLC4
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Position
complement(1237888..1239714)
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AA seq
608 aa
AA seq
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MHAVVQSVTDRIIERSKVSRAKYLAALDEAKQNGVHRSSLSCGNLAHGFAACNPDDKQSI
KGLTKANIGIVTSFNDMLSAHQPYETYPDLLKQACAEIGSVAQVAAGVPAMCDGVTQGQP
GMELSLLSREVIAMSTAIGLSHNMFDGALLLGICDKIVPGLLIGALSFGHLPMLFVPAGP
MKSGIPNKEKARIRQKFAQGLIDRTALLEAESASYHSAGTCTFYGTANSNQLMLEVMGLQ
LPGSSFVNPDDPLREALSKTAAKQACRLTEMGTQYSPIGEIVNEKSIVNGIVALLATGGS
TNLTMHIVAAARAAGVIINWDDFSELSDAVPLVARVYPNGHADINHFHAAGGMAFLIKEL
LDAGMLHENVNTVAGQGLRRYTQEPRLIDGEIKWVDGQATSLDSEVLTSVANPFQANGGL
KLLKGNLGRAVIKVSAVSEQHRVVEAPAVVIDDQNKLEAIFKSGDLDKDCVVVVKGQGPK
AVGMPELHKLTPILGTLQDRGFKVALLTDGRMSGASGKVPAAIHLTPEALDGGLISKVQS
GDMIRVDALTGDLTLLVSDAELEARVAEKVELRDTNYGMGRELFGALRSNLSSPETGARC
TSAIDEIY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagttgtacaatctgtaaccgatagaattatcgaacgcagtaaagtgtcacgg
gctaaatacctggcggcactcgatgaagcaaaacaaaatggtgttcatcgcagttctttg
agctgtggcaacttggcccatggatttgcagcttgtaatccagatgataagcaatctatt
aaaggcttaactaaggctaatataggcatagttacgtcattcaacgatatgctctcggct
caccagccttacgaaacttatccggacttattgaagcaggcttgtgccgaaatcggtagc
gtggctcaggtcgctgctggcgtgccagccatgtgcgatggtgtgactcaaggtcagcca
ggcatggagctcagtcttcttagccgcgaagtgattgctatgtccacggcaattggtctt
tctcataacatgttcgacggcgccttgttactgggtatatgtgacaaaatagtgcctggc
ttattgatcggggcacttagcttcggtcacctacctatgttattcgtgcctgccggtccg
atgaagtcggggatccccaataaagagaaggcccgtattcgtcagaagtttgctcaaggg
ctcatcgatagaacggcgctgcttgaagctgaatcagcttcttatcacagtgctggaact
tgtactttttatggcaccgcaaacagtaatcaattgatgctagaagtcatgggactgcaa
ctgccaggttcctcgtttgtcaatccagatgaccccttaagagaagcattaagtaagact
gccgcaaagcaagcatgtcgcttaactgagatgggtacccaatattcgcctatcggtgag
atagtaaacgaaaaatccattgtgaacggtatcgtcgcgttactggcgacaggcggttcg
actaatctcaccatgcacattgttgccgctgctcgtgctgctggcgttatcattaactgg
gatgatttctctgagttatcagacgctgtgccactggttgctcgtgtatatccaaatggt
catgcggacatcaaccatttccacgccgctggcggtatggctttcttaattaaagagcta
ctcgatgccggaatgctccatgaaaatgtgaataccgttgctggccaaggccttcgtcgt
tatacccaagagcctagattaatcgatggggaaattaagtgggtagacggtcaagcgacc
agtctggattcagaggtactgacgtcggtcgctaatcctttccaggccaacggtggtttg
aaactgctaaaaggcaatttgggccgagctgtcatcaaggtgtctgctgtgtctgagcaa
catagagtcgtcgaggctccagctgttgttatcgatgatcagaataaacttgaagccatc
tttaaatctggcgatctcgataaagattgtgtcgttgtcgttaaggggcagggtcctaaa
gctgttggtatgcctgagctacataagctcactccgatcttaggcacattgcaagatcgt
ggttttaaggttgcattactgacagatggtcgtatgtcaggcgcgtcgggtaaagttcct
gcagccattcatctaacgccagaagccctcgatggtggcttgatttccaaggtacaatcc
ggcgacatgatccgtgtcgatgcactgaccggcgatctaaccttattagtcagcgacgcc
gaactcgaggcgcgcgttgcggagaaagtggagcttcgcgataccaattacggtatgggc
cgagagttattcggtgcattaagatcaaatttaagtagtcctgaaacgggtgcacgctgc
accagtgctatcgacgaaatctattaa
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