Shewanella psychrophila: Sps_01165
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Entry
Sps_01165 CDS
T05063
Name
(GenBank) Holliday junction endonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sps_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsw03400
]
Sps_01165
Enzymes [BR:
spsw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Sps_01165
DNA repair and recombination proteins [BR:
spsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sps_01165
RecFOR pathway proteins
Sps_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
AQS36337
UniProt:
A0A1S6HLE0
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All DBs
Position
complement(1283196..1283717)
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AA seq
173 aa
AA seq
DB search
MSIILGIDPGSRITGYGVIKRNGRHPVYLGSGCIRTSSEDFPYRLKQIFDGISEIIRQYQ
PTEFAIERVFMAKNADSALKLGQARGAAIVAATNANLPVGEYSATQIKSAVVGTGKAQKS
QVQHMVQQILKLSACPQADAADALGVAICHFHTSQSLLALGGMANKRTYGRYR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataatactcggtattgatcctggttcaaggatcacaggttatggggtgatcaaa
cgaaatgggcggcaccccgtatacttgggaagtggctgtattcgaactagttcagaagat
tttccttatcgccttaaacaaatttttgatggtatctccgaaataattcggcagtaccag
cctactgaatttgccattgagcgtgtttttatggctaaaaatgccgattcggcacttaaa
ttaggccaagcaagaggcgctgctatcgttgctgcaaccaatgcaaatcttcctgttggc
gaatactcggcgacacagataaaaagtgccgtagtaggtacgggcaaggcacagaaatct
caagttcagcacatggtacagcaaattcttaaattatcggcttgcccacaagccgatgcc
gccgatgcattaggtgtcgcaatttgtcattttcataccagtcaaagcctgttagcttta
ggcggaatggcgaacaaaagaacatatggacgatatagatga
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