KEGG   Shewanella psychrophila: Sps_01203
Entry
Sps_01203         CDS       T05063                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spsw  Shewanella psychrophila
Pathway
spsw03030  DNA replication
spsw03430  Mismatch repair
spsw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sps_01203
   03430 Mismatch repair
    Sps_01203
   03440 Homologous recombination
    Sps_01203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spsw03032]
    Sps_01203
   03400 DNA repair and recombination proteins [BR:spsw03400]
    Sps_01203
Enzymes [BR:spsw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sps_01203
DNA replication proteins [BR:spsw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sps_01203
DNA repair and recombination proteins [BR:spsw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sps_01203
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AQS36372
UniProt: A0A1S6HLI7
LinkDB
Position
complement(1324753..1325481)
AA seq 242 aa
MNIVSSAKRQIILDTETTGMNQSAGAIYLGHRIIEIGCVEVINRRLTGRHYHEYINPQQL
IDEEAIEVHGISNEYVANKPKFSEIAQSFIEFIDGAEVVAHNASFDISFMDHEFGLLQPK
GPKTADICAILDTLAIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLL
MTGGQTKFNLSSETGGEGAGGIIRLSQERTKLKVISASADELAKHEARLDIVAKGGLCAW
RE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaacatagtttctagtgcaaaaaggcagatcattctcgatacagaaaccacgggtatg
aaccagagcgcaggtgctatctatcttggtcatcgaatcatagaaattggttgtgtcgaa
gtgattaatcgtcgcttgaccggtcgtcattatcatgaatatattaatccgcaacagctt
atcgacgaagaagccattgaagtccatggtattagcaatgaatatgtcgcgaacaagcca
aaattttccgagatagcacagagttttatcgagtttattgatggtgccgaagtggtggct
cataacgcgtcgttcgatattagcttcatggaccatgagtttggcttattacagcccaaa
ggccctaaaacggcagatatctgtgccattctagataccttagccattgctaagtttttg
cacccaggtcaaaaaaataacctggatgcattatgtaaacgttatggtatcgataactca
cgtcgagaactccacggcgcattattagatgcggagatcttagccgatgtctatctattg
atgactggcggacaaaccaagtttaatctttcgagcgaaaccggaggcgagggggctggt
ggcatcatacgattaagccaagaacgtacaaaacttaaagtgatctcagcatcggccgat
gaactagctaagcatgaagcgcgactcgatattgtggctaagggcggactttgtgcctgg
cgtgaataa

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