Shewanella psychrophila: Sps_01275
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Entry
Sps_01275 CDS
T05063
Name
(GenBank) autotransporter secretion outer membrane protein TamA
KO
K07278
translocation and assembly module TamA
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_01275
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_01275
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GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AQS36443
UniProt:
A0A1S6HLQ2
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Position
1402192..1404000
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AA seq
602 aa
AA seq
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MSGLLSTFSVMADDFLTLKLTGIDASLTQNIEAHLGTLPTSQVQRRAFIFNAEDNVNAAL
NSLGYYHGEVAQDVQERPDQPWVLSLDVTPGAPTRIEWIDLHFDGEILEDTFILQWLDKI
AIKPGDILNHGKYELVKSQLITLALARGYFDGKYVQSSIQVNRDANTAKITLHYDSGSRY
HMGEVTFEGDGLQDGFLDTLIPFEKNSAYSTGSLSRLNRELLDTSYFSNIKVLPQVDKAQ
GLDVPIKVELSPKPSHSIELGLGVDIGNTAGSDNELEPRISINWRTPLLNSYGHSLETSL
EWSPDRPKYLSTYTIPLTHPLDDQLKIRFGMLRDKYGVNQVYDPNEHKYNNTGELEASKG
LIAVIRQQRLKDNWILSYSVEAMKEYYTQSETDYAPKFLLFGTSISKTIRGDNTLDPKSG
FFQYYSIEYANPDLGSAIQLTRIQTKYKWINTFFDKHRIVSRLDLGVNLADDADLALIPP
SLRYFAGGDQSIRGYSYQELGPYIDYTTEGGDSARQVVGGRYLMVGSLEYQYYVTPTWRV
GTFIDAGNAFDVNQIEPIVSVGGGIHWISPIGPIKLDLGVGLKETDTVDRPWRIHLTMGA
EL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttgctcagcacattttccgtcatggcagatgatttccttacattaaagctc
actggcatcgatgcctctttaacgcaaaacatagaagcacatttagggaccttgcccaca
tcacaagtccaacgccgcgcttttatctttaatgccgaagataatgttaacgcggccttg
aattctctggggtattaccatggagaggtcgctcaagatgtgcaagagcgcccagatcag
ccttgggttttatcattagatgtgacacctggcgcacccacccgcatcgaatggatagat
ctacattttgacggcgaaatcctcgaagacacttttatcctacaatggcttgataagatc
gcgatcaaacctggcgacattctcaatcacggcaagtacgaattggttaaatctcaattg
atcaccctcgcattagccagaggctattttgacgggaaatatgttcaatcttccatccaa
gttaaccgtgatgcaaacacagcgaagattaccctgcattatgattcaggctccaggtac
catatgggtgaagtgacttttgaaggagatggcttacaagatggatttctagacacctta
attccatttgaaaaaaactcagcctatagcacaggcagcttatcccgcttaaacagagag
ttattagacaccagctatttttctaatatcaaggtattgcctcaggttgataaagcacag
ggactagatgtgcccattaaggttgagttaagcccaaaaccaagtcactcgatagaatta
ggtttaggtgtcgatattggtaacacagccggctcagataatgagcttgaacctagaatc
agcattaactggcgaacacctctattaaacagttacgggcattctttagaaaccagttta
gaatggtccccggaccgtcccaaatatctatccacttacaccatccctttgactcaccct
ttggatgatcagttaaaaattcgttttggcatgctcagggataaatacggggtgaatcag
gtctacgaccctaacgaacataagtacaataacactggtgaactcgaggcgagtaaaggc
ttaattgccgttattcgtcagcaaaggctcaaggataactggatattgagttactcggtt
gaggcaatgaaagaatactacactcagtctgaaactgattacgcaccaaagtttttactc
tttggtaccagcatttctaagactatccgtggcgataataccttagatcccaaatctgga
ttttttcagtattatagcatcgagtatgctaatccggatttggggtcagctatccagctc
acacgtatacaaacaaaatacaaatggattaacacctttttcgacaaacacaggatcgtt
tctcgattagacttaggggtaaacttagccgatgacgctgacttagcccttatcccccct
tcattgcgctattttgccggtggtgaccagagcatcaggggctacagctatcaagagtta
gggccatacatcgactacactactgaaggcggtgattcagccagacaagttgtcggggga
cgttatttaatggtgggcagcctagagtaccagtattacgtaaccccaacctggcgtgtg
ggcacttttatcgatgcgggtaatgcatttgatgtcaaccaaatagagcctatagtctca
gttggtggcggcattcattggatatcacccatcgggcccatcaagctggatctcggtgtg
ggtcttaaagaaacagacacagtagacagaccctggcggatccacttaaccatgggggca
gagctatga
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