Shewanella psychrophila: Sps_01316
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Entry
Sps_01316 CDS
T05063
Name
(GenBank) transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_01316
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sps_01316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_71
Motif
Other DBs
NCBI-ProteinID:
AQS36484
UniProt:
A0A1S6HLV6
LinkDB
All DBs
Position
1452490..1453347
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AA seq
285 aa
AA seq
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MTTNKHISFNQSHKLCFRQQTLTNNLGWAHYQNSQERLFYVNEKQHTLSMYLSGGYQTHR
TDVRSGFGAPGRFCLMPKGSESRWQLGTPQQFMHLYFDDSYLKQLAIEVFDMDPRTIALP
ELTFFENPGLESLYRYNMAQANWHQTSPLALEQVTNTILVSLLQNSTMTKHVGQLKGGLS
PATVKKVRDFIHANFYRQIFLSELASLAQLSEYHFCRMFKESFARTPQAYLTYVRIEQVK
HLIKTTSDNLMDIALNCGFSNQSHMGRYFKKQLGITPKAYQKNLF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaataagcacattagttttaatcaatctcacaaactttgttttcgccagcag
acgctaacaaataacctcggctgggctcattatcaaaatagtcaggagcgtttattctac
gtcaatgagaaacaacacaccctaagtatgtaccttagcggcggttatcaaacccaccgt
accgatgtgcgatctggattcggtgctccgggacgattttgtttgatgcctaaaggcagc
gagagtcgttggcaacttgggactccccagcaatttatgcacctttacttcgatgacagt
tacctaaagcaactggccattgaagtattcgatatggacccacgcaccatagccttacct
gaattgaccttcttcgagaatcctggactagagtcactttatcgatacaatatggctcaa
gccaactggcatcaaaccagtccgctggcccttgagcaggtgaccaataccatactggtt
tcactgctacaaaacagcactatgactaaacatgtcggtcagttaaaaggaggcctttct
cccgcaaccgtcaaaaaagtcagggactttatccacgccaatttctatcgtcagatattt
ttaagtgaattagcctcacttgctcagctgagtgaatatcatttttgccgcatgtttaag
gaaagttttgcccgcacgccacaagcgtatctcacctatgtcagaatcgagcaggtcaag
caccttatcaagacaacatctgataatttaatggatatcgcgttgaactgcggattctca
aaccaaagccatatgggtcgatactttaagaaacaattaggcatcacaccaaaagcttac
caaaagaacctgttttaa
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