Shewanella psychrophila: Sps_01792
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Entry
Sps_01792 CDS
T05063
Name
(GenBank) fatty oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00071
Fatty acid degradation
spsw00280
Valine, leucine and isoleucine degradation
spsw00310
Lysine degradation
spsw00362
Benzoate degradation
spsw00380
Tryptophan metabolism
spsw00410
beta-Alanine metabolism
spsw00640
Propanoate metabolism
spsw00650
Butanoate metabolism
spsw00907
Pinene, camphor and geraniol degradation
spsw00930
Caprolactam degradation
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
spsw01212
Fatty acid metabolism
Module
spsw_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sps_01792
00650 Butanoate metabolism
Sps_01792
09103 Lipid metabolism
00071 Fatty acid degradation
Sps_01792
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sps_01792
00310 Lysine degradation
Sps_01792
00380 Tryptophan metabolism
Sps_01792
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sps_01792
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sps_01792
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sps_01792
00930 Caprolactam degradation
Sps_01792
Enzymes [BR:
spsw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sps_01792
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sps_01792
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sps_01792
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
AQS36956
UniProt:
A0A1S6HN57
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All DBs
Position
complement(2009735..2011861)
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AA seq
708 aa
AA seq
DB search
MEKTFNLVRREDGIAVLTIDVPGETMNTLRTEFGPEITEVLAEIKADTSIKGLVLASGKK
DCFVAGADISMLDACTSVADAKALSQQGHIVFNELEALSIPVVAAIDGVCLGGGLELALA
CHQRVCSQNSKTMMGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVDDVVPESILLATAVEMALKGKRSPKKVKKSVVNKLLEGTSVGRNIIFDQAGKQVQKK
TQGNYPAPAKIIDSVRQGMAKGKTKGLEVEASHFAELVMSKESAALRSIFFATTEMKKET
GAGDVEPRKVNKAMVLGGGLMGGGIASVTTTKAKIPARVKDISEQGLSNALSYAYKLLDK
GVKRRHMTPSARDNIMSLMTTTTEYKGIKDADIVVEAVFEDLNLKHQMVKDVERECGENT
IFASNTSSLPISQIAEAASRPENVIGLHYFSPVEKMPLVEVIAHKKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILEAELGERFKAPAAFDKLLRDDRKGRKNGKGFYLYASKAKKKGKQVDE
SVYQVLGLKPGVNAEVSEVAQRCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFL
GGPFHYIDTLGAGVLVAKLEKYQAKHGDRFAPCEKLKEMAESNQHFFD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacgtttaatttagttcgccgtgaagatggcatagccgtattgacgatagat
gtacctggcgaaaccatgaataccttgcgcaccgagtttggtcccgagatcactgaagta
ttggcagaaattaaagccgataccagtattaagggcctggtgttagcctctggcaagaaa
gattgtttcgttgctggtgctgatatctccatgttggatgcctgtacttcggtggcagac
gctaaggcgctgtcacagcaaggccatattgtctttaacgagctagaagctttgtctatc
ccagttgttgcggcgatagatggtgtgtgtcttggcggtggtctggaactggcattggct
tgtcatcagcgcgtatgtagccaaaactcaaagaccatgatgggcgtgcctgaggttcag
ctaggcctgttaccaggtggcggcggaacccaaagattacctagactcgttggtattact
acggcgttagatatgatgctgacgggtaagcagatccgtcctaagcaagcgttgaagatg
ggtctggtggacgatgtcgtacctgagtcgatactgttggccaccgccgttgaaatggcg
cttaaaggaaaacgttcacctaagaaggtgaagaagtctgtggttaacaagttactcgaa
ggcacttctgttggccgaaatatcatttttgatcaagcgggtaagcaagttcaaaagaag
actcagggtaattatcctgcgccagccaagatcatcgacagtgtgcgtcaaggtatggct
aaggggaaaaccaaaggactcgaagtggaagcaagtcattttgccgagctggttatgtcg
aaagagtcggctgcattaagaagtatcttctttgccacgaccgaaatgaagaaagagact
ggcgctggtgatgttgagccacgtaaggttaacaaggcaatggtactcggtggcggcttg
atgggtggcggtattgcgtctgtaacgaccaccaaagccaagatccctgcgcgagtgaaa
gatatcagcgagcagggccttagcaatgcactctcttatgcttataagctgctcgataaa
ggagtaaagcgtcgccatatgacgccatcggctagagacaatatcatgtcgctaatgacc
acaaccacagaatataaaggtattaaagatgccgatatcgtggttgaggcggtgtttgaa
gacttgaaccttaagcatcaaatggtaaaagatgttgaacgtgagtgtggtgagaacacc
attttcgcttcaaatacctcttcactgcctatttcacagattgcagaagcggcctcccgt
cctgaaaatgtcatcggtctacattacttttctcctgttgagaaaatgcctctggttgaa
gtcatcgctcataagaaaacttcgccagagaccattgcgactacggttgcttttgcccgc
aagcaggggaaaacaccaatcgtcgtacaggacggtgccggtttctacgttaaccgtatt
ctagcgctctatatgaatgaagcagcgcaattgctacttgaaggtcagagtgttgaacat
ttagataaggcactggttaagtttggtttccctgttggtcctatgacactgctcgatgaa
gtcggtatcgatgtaggtgctaagatttctcctatattggaagctgaattaggtgagcga
tttaaggctcctgcagcatttgataagttgcttagggatgatagaaagggtcgtaagaat
ggtaaaggtttctatctgtacgctagtaaagccaagaagaaaggtaagcaagttgatgag
agtgtatatcaagtacttggcctgaaacctggcgtgaatgcagaagtttctgaagtcgca
caacgatgtgttgttcagatgctcaatgaggctgtacgttgcttggaagaggggatcatt
gcatcacctcgtgatggtgatattggtgctatcttcggtattggtttcccaccattcctg
ggtggcccattccactatattgatacactaggtgctggcgttttagttgctaagctagag
aaatatcaagctaagcatggcgacaggtttgcaccttgtgaaaagttaaaagagatggct
gagagcaatcagcattttttcgattaa
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