Shewanella psychrophila: Sps_01824
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Entry
Sps_01824 CDS
T05063
Name
(GenBank) outer membrane protein/peptidoglycan-associated (lipo)protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_01824
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_01824
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
MipA
Porin_4
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AQS36988
UniProt:
A0A1S6HNA3
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All DBs
Position
complement(2046635..2047735)
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AA seq
366 aa
AA seq
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MYSLKRTSSLVQISALSLLASSSFFAVADNIAQVNEVKANDALTVQDDSFFYLGAKGGWV
NYQNACEAQAVDCDANDTAWGGFAGYQFHRNWGVEAGYDDFGQASAIYPETGLLNEYIGT
MKGWEFSLKGNLPLTENLDLFGKAGTLRWDGDNTGPFSYSSDNGWSPMVGIGLEYKLTPS
WAARVEYQYFDSVGSDQLGGSNIHFTSLGLSYRFGQTKSAAKAVTLPAPVEQVIAPAITP
SSIVITAMTQAVHFDFDSEVPLQTHILVEVAEHLNQYPSSSVVLQGYTDAVGASGYNLKL
SKRRAESVASYLKELGVSEGQISVEALGETHPEVDNITEAHRANNRRVYITIPELTLSLD
SAEPAQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgttgaagcgcacttcctctcttgttcaaatatcggccttgtcactgctggca
agcagttcattttttgctgttgcagacaacatagctcaagttaatgaggttaaggcaaat
gatgccttaactgtacaagatgatagtttcttctatctaggtgccaaaggcggttgggtt
aactatcaaaatgcctgtgaagctcaggccgtcgattgtgatgccaacgataccgcttgg
ggcgggttcgcgggttatcaatttcaccgaaattggggagttgaggccggttacgatgat
tttggccaagcgtcggcaatttaccctgaaactgggttacttaacgagtatataggcacc
atgaaaggctgggagttctctttgaagggcaacctgccactcaccgaaaacctagatcta
tttggtaaagccggaacattaagatgggacggtgacaacactggcccattttcctatagc
agcgacaatggctggtcccctatggttggcataggtttagaatataagctcactccgtct
tgggctgcgcgtgttgagtatcaatatttcgattcggtcggcagcgatcagcttgggggg
agtaatatccacttcaccagtttaggactcagctatcgcttcggccaaactaagtcggcg
gctaaagctgtaactctgccagcaccagtggagcaggttattgcgcctgccatcacgcca
agctccattgttatcaccgctatgacacaggcagtacatttcgatttcgatagtgaagtc
cctttgcagacgcatatcttggttgaagttgccgagcatctgaatcaatatccaagctca
tcggtcgtgcttcagggttacactgatgccgttggtgcttcaggctataaccttaagctt
tctaagcgacgtgccgagtctgttgccagttaccttaaagagttaggggtgagcgaagga
caaataagcgtcgaggcattaggtgagactcatcctgaggtcgataacatcaccgaagcg
cacagagccaataatcgccgggtgtatatcactatcccagagttaacattaagcttggac
agtgctgagcctgctcagtga
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